Conservation of cofitness between PfGW456L13_4052 and PfGW456L13_1224 in Pseudomonas fluorescens GW456-L13

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_4052 Aconitate hydratase (EC 4.2.1.3) 1.0 PfGW456L13_1224 Vfr transcriptional regulator / Cyclic AMP receptor protein 0.34 6
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_3888 Aconitate hydratase (EC 4.2.1.3) 0.97 Pf1N1B4_2551 Vfr transcriptional regulator / Cyclic AMP receptor protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_00565 aconitate hydratase 0.96 AO353_07200 cyclic AMP receptor protein 0.27 95
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_2301 Aconitate hydratase (EC 4.2.1.3) 0.95 Pf6N2E2_4828 Vfr transcriptional regulator / Cyclic AMP receptor protein low > 103
Pseudomonas fluorescens SBW25 0.89 PFLU_RS07595 aconitate hydratase AcnA 0.92 PFLU_RS27355 cAMP-activated global transcriptional regulator CRP low > 109
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS07595 aconitate hydratase AcnA 0.92 PFLU_RS27355 cAMP-activated global transcriptional regulator CRP low > 109
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_02385 aconitate hydratase 0.95 AO356_14450 cyclic AMP receptor protein low > 104
Pseudomonas simiae WCS417 0.88 PS417_07515 aconitate hydratase 0.92 PS417_25700 cyclic AMP receptor protein low > 88
Pseudomonas sp. RS175 0.88 PFR28_01099 Aconitate hydratase A 0.93 PFR28_04041 Cyclic AMP receptor-like protein low > 88
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_3404 aconitase 0.79 Psyr_4577 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_3404 aconitase 0.79 Psyr_4577 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp low > 86
Pseudomonas putida KT2440 0.82 PP_2112 aconitate hydratase 1 0.86 PP_0424 DNA-binding transcriptional dual regulator low > 96
Pseudomonas sp. S08-1 0.80 OH686_02100 aconitate hydratase 1 0.85 OH686_15145 Cyclic AMP receptor protein low > 80
Acinetobacter radioresistens SK82 0.72 MPMX26_00480 Aconitate hydratase A 0.54 MPMX26_01094 Cyclic AMP receptor-like protein — —
Marinobacter adhaerens HP15 0.72 HP15_3433 Aconitate hydratase (EC 4.2.1.3) (from data) 0.72 HP15_3307 transcriptional regulator, Crp/Fnr family low > 73
Pseudomonas stutzeri RCH2 0.70 Psest_2521 aconitate hydratase 1 0.84 Psest_3646 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 67
Rahnella sp. WP5 0.69 EX31_RS09885 aconitate hydratase AcnA 0.63 EX31_RS04620 cAMP-activated global transcriptional regulator CRP — —
Serratia liquefaciens MT49 0.68 IAI46_13950 aconitate hydratase AcnA 0.64 IAI46_23580 cAMP-activated global transcriptional regulator CRP — —
Klebsiella michiganensis M5al 0.68 BWI76_RS11940 aconitate hydratase 1 0.64 BWI76_RS25990 cAMP-activated global transcriptional regulator CRP — —
Enterobacter sp. TBS_079 0.67 MPMX20_02499 Aconitate hydratase A 0.64 MPMX20_04260 cAMP-activated global transcriptional regulator CRP — —
Escherichia coli ECOR38 0.67 HEPCGN_25625 acnA aconitate hydratase AcnA 0.64 HEPCGN_16065 crp cAMP-activated global transcriptional regulator CRP — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS07705 aconitate hydratase AcnA 0.64 ECOLIN_RS19230 cAMP-activated global transcriptional regulator CRP — —
Escherichia coli BW25113 0.67 b1276 acnA aconitate hydratase (NCBI) 0.64 b3357 crp DNA-binding transcriptional dual regulator (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_02406 Aconitate hydratase A 0.64 OHPLBJKB_00345 cAMP-activated global transcriptional regulator CRP — —
Escherichia coli ECRC62 0.67 BNILDI_18390 acnA aconitate hydratase AcnA 0.64 BNILDI_02480 crp cAMP-activated global transcriptional regulator CRP — —
Escherichia coli ECOR27 0.67 NOLOHH_20240 acnA aconitate hydratase AcnA 0.64 NOLOHH_09040 crp cAMP-activated global transcriptional regulator CRP — —
Escherichia coli BL21 0.67 ECD_01253 aconitate hydratase 1; aconitase A 0.64 ECD_03208 cAMP-activated global transcription factor, mediator of catabolite repression — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2709 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) 0.64 GFF3712 Cyclic AMP receptor protein low > 78
Escherichia fergusonii Becca 0.66 EFB2_02649 Aconitate hydratase A 0.64 EFB2_00465 cAMP-activated global transcriptional regulator CRP — —
Escherichia coli ECRC102 0.66 NIAGMN_26745 acnA aconitate hydratase AcnA 0.64 NIAGMN_15010 crp cAMP-activated global transcriptional regulator CRP — —
Escherichia coli ECRC98 0.66 JDDGAC_05120 acnA aconitate hydratase AcnA 0.64 JDDGAC_20870 crp cAMP-activated global transcriptional regulator CRP — —
Escherichia coli ECRC100 0.66 OKFHMN_02575 acnA aconitate hydratase AcnA 0.64 OKFHMN_17240 crp cAMP-activated global transcriptional regulator CRP — —
Escherichia coli ECRC99 0.66 KEDOAH_26190 acnA aconitate hydratase AcnA 0.64 KEDOAH_10900 crp cAMP-activated global transcriptional regulator CRP — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0949 aconitate hydratase 1 0.64 EX28DRAFT_4172 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases — —
Escherichia coli ECRC101 0.66 MCAODC_15690 acnA aconitate hydratase AcnA 0.64 MCAODC_07770 crp cAMP-activated global transcriptional regulator CRP — —
Pantoea sp. MT58 0.66 IAI47_09250 aconitate hydratase AcnA 0.64 IAI47_01965 cAMP-activated global transcriptional regulator CRP — —
Erwinia amylovora T8 0.66 OLJFJH_13545 aconitate hydratase AcnA 0.64 OLJFJH_04020 cAMP-activated global transcriptional regulator CRP — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS09315 aconitate hydratase AcnA 0.64 HER17_RS01915 cAMP-activated global transcriptional regulator CRP — —
Dickeya dadantii 3937 0.63 DDA3937_RS12555 aconitate hydratase AcnA 0.64 DDA3937_RS19445 cAMP-activated global transcriptional regulator CRP — —
Dickeya dianthicola 67-19 0.62 HGI48_RS12610 aconitate hydratase AcnA 0.64 HGI48_RS19565 cAMP-activated global transcriptional regulator CRP — —
Dickeya dianthicola ME23 0.61 DZA65_RS13065 aconitate hydratase AcnA 0.64 DZA65_RS20650 cAMP-activated global transcriptional regulator CRP — —
Lysobacter sp. OAE881 0.60 ABIE51_RS11535 aconitate hydratase AcnA 0.49 ABIE51_RS04210 cAMP-activated global transcriptional regulator CRP low > 62
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.2894.1 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) 0.46 Xcc-8004.624.1 Cyclic AMP receptor protein low > 74
Sinorhizobium meliloti 1021 0.59 SMc03846 aconitate hydratase 0.17 SMa1245 Crp/fnr-like transcriptional regulator — —
Agrobacterium fabrum C58 0.59 Atu2685 aconitate hydratase 0.16 Atu4380 Crp family transcriptional regulator low > 89
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS02165 aconitate hydratase AcnA 0.50 ABZR86_RS12045 cAMP-activated global transcriptional regulator CRP low > 74
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_06455 acnA aconitate hydratase AcnA 0.50 OKGIIK_12270 crp cAMP-activated global transcriptional regulator CRP — —
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS00785 aconitate hydratase AcnA 0.51 LRK54_RS11585 cAMP-activated global transcriptional regulator CRP — —
Rhodanobacter denitrificans MT42 0.56 LRK55_RS00560 aconitate hydratase AcnA 0.51 LRK55_RS11315 cAMP-activated global transcriptional regulator CRP — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0799 aconitate hydratase 1 0.68 B158DRAFT_0264 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 40
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF3382 Aconitate hydratase (EC 4.2.1.3) 0.28 GFF774 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 90
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1140 2-methylisocitrate dehydratase (EC 4.2.1.99) (from data) 0.27 Ac3H11_1699 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 79
Dechlorosoma suillum PS 0.49 Dsui_2347 aconitate hydratase 1 0.30 Dsui_1690 cAMP-binding protein low > 51
Paraburkholderia graminis OAS925 0.42 ABIE53_004758 aconitate hydratase 0.13 ABIE53_003893 CRP/FNR family cyclic AMP-dependent transcriptional regulator — —

Not shown: 31 genomes with orthologs for PfGW456L13_4052 only; 7 genomes with orthologs for PfGW456L13_1224 only