Conservation of cofitness between Pf6N2E2_2479 and Pf6N2E2_2179 in Pseudomonas fluorescens FW300-N2E2

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_2479 Transcription elongation factor GreB 1.0 Pf6N2E2_2179 Putrescine importer 0.23 13
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_03240 transcription elongation factor GreB 0.98 AO356_01520 porin low > 104
Pseudomonas sp. RS175 0.97 PFR28_00955 Transcription elongation factor GreB 0.96 PFR28_01269 Putrescine importer PuuP low > 88
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_2216 Transcription elongation factor GreB 0.29 PfGW456L13_4782 Amino acid transporters low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_18990 transcription elongation factor GreB 0.91 AO353_27910 porin low > 101
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.1941.1 Transcription elongation factor GreB 0.42 Xcc-8004.1643.1 Amino acid transporter low > 74
Shewanella sp. ANA-3 0.54 Shewana3_4014 transcription elongation factor GreB (RefSeq) 0.26 Shewana3_3634 amino acid permease-associated region (RefSeq) low > 73
Shewanella oneidensis MR-1 0.53 SO4631 greB transcription elongation factor GreB (NCBI ptt file) 0.26 SO4081 amino acid permease (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.52 ABIE51_RS08175 transcription elongation factor GreB 0.11 ABIE51_RS13260 amino acid permease low > 62
Dickeya dadantii 3937 0.50 DDA3937_RS19625 transcription elongation factor GreB 0.25 DDA3937_RS09815 APC family permease low > 74
Pseudomonas putida KT2440 0.49 PP_2315 Transcription elongation factor GreB 0.28 PP_1229 putrescine permease low > 96
Dickeya dianthicola ME23 0.48 DZA65_RS20845 transcription elongation factor GreB 0.26 DZA65_RS10150 APC family permease low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS19755 transcription elongation factor GreB 0.25 HGI48_RS09825 APC family permease 0.63 2
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_04765 greB transcription elongation factor GreB 0.09 OKGIIK_05015 Amino acid permease low > 52
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS01765 transcription elongation factor GreB 0.11 LRK54_RS01520 amino acid permease low > 59
Pectobacterium carotovorum WPP14 0.48 HER17_RS01650 transcription elongation factor GreB 0.27 HER17_RS12140 APC family permease low > 75
Rhodanobacter denitrificans MT42 0.48 LRK55_RS01545 transcription elongation factor GreB 0.11 LRK55_RS01310 amino acid permease low > 63
Enterobacter sp. TBS_079 0.48 MPMX20_04293 Transcription elongation factor GreB 0.26 MPMX20_02998 Low-affinity putrescine importer PlaP low > 85
Serratia liquefaciens MT49 0.47 IAI46_23795 transcription elongation factor GreB 0.28 IAI46_10565 APC family permease low > 86
Acinetobacter radioresistens SK82 0.47 MPMX26_00813 Transcription elongation factor GreB 0.24 MPMX26_00708 Low-affinity putrescine importer PlaP — —
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4137 transcription elongation factor GreB 0.28 EX28DRAFT_1496 Amino acid transporters low > 76
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS08080 transcription elongation factor GreB 0.10 ABZR86_RS06670 amino acid permease low > 74
Pantoea sp. MT58 0.47 IAI47_01810 transcription elongation factor GreB 0.25 IAI47_07130 APC family permease low > 76
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_298 Transcription elongation factor GreB 0.93 Pf1N1B4_5855 Putrescine importer low > 87
Escherichia coli ECOR38 0.46 HEPCGN_15840 greB transcription elongation factor GreB 0.26 HEPCGN_25750 puuP Putrescine importer PuuP low > 87
Rahnella sp. WP5 0.46 EX31_RS04835 transcription elongation factor GreB 0.27 EX31_RS03025 APC family permease low > 89
Escherichia coli ECRC102 0.46 NIAGMN_14800 greB transcription elongation factor GreB 0.29 NIAGMN_26620 puuP putrescine/proton symporter PuuP — —
Escherichia coli ECRC62 0.46 BNILDI_02700 greB transcription elongation factor GreB 0.29 BNILDI_18285 puuP putrescine/proton symporter PuuP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00297 Transcription elongation factor GreB 0.29 OHPLBJKB_02386 Putrescine importer PuuP low > 73
Escherichia fergusonii Becca 0.46 EFB2_00422 Transcription elongation factor GreB 0.26 EFB2_01842 Low-affinity putrescine importer PlaP low > 86
Escherichia coli BL21 0.46 ECD_03258 transcript cleavage factor 0.29 ECD_01273 putrescine importer low > 61
Escherichia coli ECRC101 0.46 MCAODC_07560 greB transcription elongation factor GreB 0.29 MCAODC_15820 puuP putrescine/proton symporter PuuP low > 87
Escherichia coli Nissle 1917 0.46 ECOLIN_RS19460 transcription elongation factor GreB 0.27 ECOLIN_RS11915 putrescine/proton symporter PlaP low > 55
Escherichia coli ECRC98 0.46 JDDGAC_20660 greB transcription elongation factor GreB 0.29 JDDGAC_04995 puuP putrescine/proton symporter PuuP low > 86
Escherichia coli ECRC100 0.46 OKFHMN_17030 greB transcription elongation factor GreB 0.29 OKFHMN_02450 puuP putrescine/proton symporter PuuP low > 80
Escherichia coli BW25113 0.46 b3406 greB transcription elongation factor GreB (NCBI) 0.29 b1296 ycjJ putative amino acid/amine transport protein (VIMSS) low > 76
Escherichia coli ECRC99 0.46 KEDOAH_11110 greB transcription elongation factor GreB 0.29 KEDOAH_26325 puuP putrescine/proton symporter PuuP — —
Escherichia coli ECOR27 0.46 NOLOHH_08820 greB transcription elongation factor GreB 0.29 NOLOHH_20135 puuP putrescine/proton symporter PuuP low > 75
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2065 transcription elongation factor GreB 0.08 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily low > 86
Klebsiella michiganensis M5al 0.46 BWI76_RS26660 transcription elongation factor GreB 0.54 BWI76_RS03640 amino acid permease-associated protein low > 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2065 transcription elongation factor GreB 0.08 Psyr_2379 amino acid/polyamine/organocation transporter, APC superfamily low > 86
Erwinia tracheiphila SCR3 0.46 LU632_RS22950 greB transcription elongation factor GreB 0.25 LU632_RS15880 APC family permease low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF612 Transcription elongation factor GreB 0.30 GFF3568 Amino acid transporter low > 78
Ralstonia solanacearum PSI07 0.42 RPSI07_RS13880 transcription elongation factor GreB 0.13 RPSI07_RS15760 amino acid permease low > 81
Ralstonia solanacearum UW163 0.42 UW163_RS10420 transcription elongation factor GreB 0.13 UW163_RS15035 amino acid permease — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS03305 transcription elongation factor GreB 0.13 RALBFv3_RS01725 amino acid permease low > 76
Ralstonia solanacearum GMI1000 0.41 RS_RS10790 transcription elongation factor GreB 0.13 RS_RS08000 amino acid permease low > 80
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS04925 transcription elongation factor GreB 0.12 RR42_RS01585 amino acid permease low > 128
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS03685 transcription elongation factor GreB 0.52 QEN71_RS06600 APC family permease low > 153
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS15215 transcription elongation factor GreB 0.13 ABZR87_RS13545 amino acid permease low > 80
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_0216 transcription elongation factor GreB 0.09 Ga0059261_1053 amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) low > 68

Not shown: 21 genomes with orthologs for Pf6N2E2_2479 only; 8 genomes with orthologs for Pf6N2E2_2179 only