Conservation of cofitness between PP_0246 and PP_5179 in Pseudomonas putida KT2440

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0246 two-component system DNA-binding response transcriptional dual regulator 1.0 PP_5179 spermidine/putrescine ABC transporter - ATP binding subunit 0.27 11
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_1772 Two-component system response regulator OmpR 0.91 Pf1N1B4_2261 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) — —
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_11745 chemotaxis protein CheY 0.92 AO353_08570 transporter — —
Pseudomonas sp. RS175 0.92 PFR28_04868 Transcriptional regulatory protein OmpR 0.92 PFR28_04293 Spermidine/putrescine import ATP-binding protein PotA low > 88
Pseudomonas simiae WCS417 0.92 PS417_01170 chemotaxis protein CheY 0.92 PS417_27115 putrescine ABC transporter, ATPase component (from data) — —
Pseudomonas fluorescens SBW25 0.92 PFLU_RS01280 two-component system response regulator OmpR 0.92 PFLU_RS28765 polyamine ABC transporter ATP-binding protein — —
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS01280 two-component system response regulator OmpR 0.92 PFLU_RS28765 polyamine ABC transporter ATP-binding protein — —
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_427 Two-component system response regulator OmpR 0.92 PfGW456L13_930 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_10170 chemotaxis protein CheY 0.92 AO356_13165 transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3905 Two-component system response regulator OmpR 0.92 Pf6N2E2_4515 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) — —
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_0258 Two-component response regulator OmpR 0.89 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_0258 Two-component response regulator OmpR 0.89 Psyr_4863 Spermidine/putrescine ABC transporter ATP-binding subunit — —
Pseudomonas sp. S08-1 0.84 OH686_11095 Two-component system response regulator OmpR 0.84 OH686_11455 Putrescine transport ATP-binding protein PotG low > 80
Pseudomonas stutzeri RCH2 0.81 Psest_3995 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.81 Psest_4282 spermidine/putrescine ABC transporter ATP-binding subunit low > 67
Shewanella loihica PV-4 0.69 Shew_3637 ompR osmolarity response regulator (RefSeq) 0.69 Shew_0974 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) low > 60
Shewanella sp. ANA-3 0.69 Shewana3_4017 ompR osmolarity response regulator (RefSeq) 0.71 Shewana3_3096 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO4633 ompR transcriptional regulatory protein OmpR (NCBI ptt file) 0.71 SO1271 polyamine ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.68 Sama_3510 ompR osmolarity response regulator (RefSeq) 0.73 Sama_2641 polyamine ABC transporter, ATP-binding protein (RefSeq) low > 62
Rahnella sp. WP5 0.67 EX31_RS04800 two-component system response regulator OmpR 0.57 EX31_RS09625 putrescine ABC transporter ATP-binding subunit PotG low > 89
Serratia liquefaciens MT49 0.67 IAI46_23790 two-component system response regulator OmpR 0.56 IAI46_08375 putrescine ABC transporter ATP-binding subunit PotG low > 86
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4138 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.58 EX28DRAFT_2098 spermidine/putrescine ABC transporter ATP-binding subunit low > 76
Escherichia coli ECRC101 0.67 MCAODC_07565 ompR_G63V two-component system response regulator OmpR 0.57 MCAODC_25170 potG putrescine ABC transporter ATP-binding subunit PotG — —
Escherichia coli ECRC98 0.67 JDDGAC_20665 ompR_G63V two-component system response regulator OmpR 0.57 JDDGAC_09590 potG putrescine ABC transporter ATP-binding subunit PotG — —
Escherichia coli ECRC62 0.67 BNILDI_02695 ompR_G63V two-component system response regulator OmpR 0.57 BNILDI_20580 potG putrescine ABC transporter ATP-binding subunit PotG — —
Dickeya dadantii 3937 0.67 DDA3937_RS19620 two-component system response regulator OmpR 0.55 DDA3937_RS09465 putrescine ABC transporter ATP-binding subunit PotG 0.49 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF613 Two-component system response regulator OmpR 0.57 GFF759 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 78
Escherichia coli ECOR38 0.67 HEPCGN_15845 ompR_G63V two-component system response regulator OmpR 0.57 HEPCGN_02075 potG putrescine ABC transporter ATP-binding subunit PotG low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00298 Transcriptional regulatory protein OmpR 0.57 OHPLBJKB_02813 Spermidine/putrescine import ATP-binding protein PotA low > 73
Dickeya dianthicola ME23 0.67 DZA65_RS20840 two-component system response regulator OmpR 0.56 DZA65_RS09795 putrescine ABC transporter ATP-binding subunit PotG low > 75
Pectobacterium carotovorum WPP14 0.67 HER17_RS01700 two-component system response regulator OmpR 0.56 HER17_RS12495 putrescine ABC transporter ATP-binding subunit PotG low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS19750 two-component system response regulator OmpR 0.56 HGI48_RS09485 putrescine ABC transporter ATP-binding subunit PotG low > 71
Escherichia coli ECRC101 0.67 OKFHMN_17035 ompR_G63V two-component system response regulator OmpR 0.57 OKFHMN_05955 potG putrescine ABC transporter ATP-binding subunit PotG — —
Klebsiella michiganensis M5al 0.67 BWI76_RS26665 DNA-binding response regulator 0.56 BWI76_RS09465 polyamine ABC transporter ATP-binding protein low > 92
Escherichia coli ECRC99 0.67 KEDOAH_11105 ompR_G63V two-component system response regulator OmpR 0.57 KEDOAH_21955 potG putrescine ABC transporter ATP-binding subunit PotG — —
Escherichia coli ECOR27 0.67 NOLOHH_08825 ompR_G63V two-component system response regulator OmpR 0.57 NOLOHH_22325 potG putrescine ABC transporter ATP-binding subunit PotG low > 57
Escherichia fergusonii Becca 0.67 EFB2_00423 Transcriptional regulatory protein OmpR 0.57 EFB2_03206 Spermidine/putrescine import ATP-binding protein PotA low > 86
Pantoea sp. MT58 0.67 IAI47_01820 two-component system response regulator OmpR 0.57 IAI47_13040 putrescine ABC transporter ATP-binding subunit PotG low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS19455 two-component system response regulator OmpR 0.57 ECOLIN_RS04555 putrescine ABC transporter ATP-binding subunit PotG — —
Escherichia coli BW25113 0.67 b3405 ompR osmolarity response regulator (NCBI) 0.57 b0855 potG ATP-binding component of putrescine transport system (VIMSS) low > 76
Escherichia coli ECRC102 0.67 NIAGMN_14805 ompR_G63V two-component system response regulator OmpR 0.57 NIAGMN_04000 potG putrescine ABC transporter ATP-binding subunit PotG — —
Enterobacter sp. TBS_079 0.67 MPMX20_04292 Transcriptional regulatory protein OmpR 0.57 MPMX20_01496 Spermidine/putrescine import ATP-binding protein PotA low > 85
Escherichia coli BL21 0.67 ECD_03257 response regulator in two-component regulatory system with EnvZ 0.57 ECD_00860 putrescine ABC transporter ATPase low > 60
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4930 Two-component system response regulator OmpR 0.53 GFF2034 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) low > 90
Paraburkholderia graminis OAS925 0.55 ABIE53_002101 two-component system phosphate regulon response regulator OmpR 0.54 ABIE53_002369 putrescine transport system ATP-binding protein low > 113
Castellaniella sp019104865 MT123 0.55 ABCV34_RS08585 two-component system response regulator OmpR 0.51 ABCV34_RS02365 polyamine ABC transporter ATP-binding protein — —
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_00886 two component transcriptional regulator, winged helix family 0.55 H281DRAFT_05181 putrescine transport system ATP-binding protein low > 103
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS09315 chemotaxis protein CheY 0.57 BPHYT_RS23145 putrescine/spermidine ABC transporter ATP-binding protein — —
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS22030 two-component system response regulator OmpR 0.56 QEN71_RS12950 polyamine ABC transporter ATP-binding protein low > 153
Agrobacterium fabrum C58 0.35 Atu2206 two component response regulator 0.50 Atu0610 ABC transporter, nucleotide binding/ATPase protein — —
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_03026 two-component response regulator petR 0.45 CCNA_03235 spermidine/putrescine transport ATP-binding protein potA low > 67
Caulobacter crescentus NA1000 0.34 CCNA_03026 two-component response regulator petR 0.45 CCNA_03235 spermidine/putrescine transport ATP-binding protein potA low > 66
Phaeobacter inhibens DSM 17395 0.33 PGA1_c34130 protein PetR 0.44 PGA1_c34430 putrescine transport ATP-binding protein PotG — —

Not shown: 18 genomes with orthologs for PP_0246 only; 12 genomes with orthologs for PP_5179 only