Conservation of cofitness between PP_0356 and PP_5128 in Pseudomonas putida KT2440

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0356 malate synthase G 1.0 PP_5128 Dihydroxy-acid dehydratase 0.37 17
Pseudomonas sp. S08-1 0.88 OH686_10405 malate synthase G 0.93 OH686_14100 dihydroxy-acid dehydratase low > 80
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_07560 malate synthase G 0.97 AO353_08345 dihydroxy-acid dehydratase low > 101
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_1139 Malate synthase G (EC 2.3.3.9) 0.97 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2478 Malate synthase G (EC 2.3.3.9) 0.96 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_4752 Malate synthase G (EC 2.3.3.9) 0.96 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.25 89
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_14100 malate synthase G 0.96 AO356_13250 dihydroxy-acid dehydratase low > 104
Pseudomonas simiae WCS417 0.86 PS417_26040 malate synthase 0.96 PS417_26890 dihydroxy-acid dehydratase 0.51 36
Pseudomonas sp. RS175 0.86 PFR28_04110 Malate synthase G 0.96 PFR28_04278 Dihydroxy-acid dehydratase low > 88
Pseudomonas fluorescens SBW25 0.85 PFLU_RS27685 malate synthase G 0.96 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS27685 malate synthase G 0.96 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4700 malate synthase 0.94 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4700 malate synthase 0.94 Psyr_0469 dihydroxyacid dehydratase low > 86
Pseudomonas stutzeri RCH2 0.84 Psest_0354 Malate synthase G (EC 2.3.3.9) (from data) 0.94 Psest_0234 dihydroxy-acid dehydratase — —
Marinobacter adhaerens HP15 0.70 HP15_2188 malate synthase G 0.78 HP15_595 dihydroxy-acid dehydratase 0.65 23
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS31820 malate synthase G 0.80 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Sinorhizobium meliloti 1021 0.69 SMc02581 malate synthase G 0.77 SMc04045 dihydroxy-acid dehydratase 0.36 73
Rhizobium sp. OAE497 0.69 ABIE40_RS19490 malate synthase G 0.76 ABIE40_RS08005 dihydroxy-acid dehydratase low > 107
Agrobacterium fabrum C58 0.68 Atu0047 malate synthase G 0.76 Atu1918 dihydroxy-acid dehydratase — —
Azospirillum sp. SherDot2 0.68 MPMX19_04824 Malate synthase G 0.73 MPMX19_05356 Dihydroxy-acid dehydratase — —
Mycobacterium tuberculosis H37Rv 0.68 Rv1837c Malate synthase G GlcB 0.32 Rv0189c Probable dihydroxy-acid dehydratase IlvD (dad) — —
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS09815 malate synthase 0.71 BPHYT_RS10100 dihydroxy-acid dehydratase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00963 malate synthase 0.80 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Acidovorax sp. GW101-3H11 0.66 Ac3H11_4835 Malate synthase G (EC 2.3.3.9) 0.80 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Paraburkholderia graminis OAS925 0.66 ABIE53_002201 malate synthase 0.80 ABIE53_006513 dihydroxy-acid dehydratase low > 113
Variovorax sp. SCN45 0.66 GFF6305 Malate synthase G (EC 2.3.3.9) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Castellaniella sp019104865 MT123 0.65 ABCV34_RS12110 malate synthase G 0.70 ABCV34_RS14810 dihydroxy-acid dehydratase low > 48
Variovorax sp. OAS795 0.65 ABID97_RS04710 malate synthase G 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Rhodopseudomonas palustris CGA009 0.65 TX73_021855 malate synthase G 0.74 TX73_007515 dihydroxy-acid dehydratase — —
Desulfovibrio vulgaris Miyazaki F 0.63 DvMF_2183 malate synthase G (RefSeq) 0.37 DvMF_2034 dihydroxy-acid dehydratase (RefSeq) low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3040 Malate synthase G (EC 2.3.3.9) 0.65 GFF2073 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 90
Acinetobacter radioresistens SK82 0.63 MPMX26_01247 Malate synthase G 0.28 MPMX26_03019 Dihydroxy-acid dehydratase low > 36
Phaeobacter inhibens DSM 17395 0.62 PGA1_c09900 malate synthase GlcB 0.73 PGA1_c29490 dihydroxy-acid dehydratase LivD low > 62
Dinoroseobacter shibae DFL-12 0.61 Dshi_1227 malate synthase G (RefSeq) 0.29 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Alteromonas macleodii MIT1002 0.61 MIT1002_02833 Malate synthase G 0.78 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Desulfovibrio vulgaris Hildenborough JW710 0.60 DVU0701 glcB malate synthase G (TIGR) 0.37 DVU3373 ilvD dihydroxy-acid dehydratase (TIGR) low > 55
Escherichia coli BW25113 0.60 b2976 glcB malate synthase (NCBI) 0.74 b3771 ilvD dihydroxy-acid dehydratase (NCBI) low > 76
Escherichia coli BL21 0.60 ECD_02844 malate synthase G 0.74 ECD_03649 dihydroxyacid dehydratase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00731 Malate synthase G 0.74 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECOR38 0.60 HEPCGN_18015 glcB malate synthase G 0.74 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 85
Escherichia coli ECOR27 0.60 NOLOHH_10940 glcB malate synthase G 0.74 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 57
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS15290 malate synthase G 0.25 A4249_RS10030 dihydroxy-acid dehydratase low > 48
Escherichia coli Nissle 1917 0.59 ECOLIN_RS17120 malate synthase G 0.74 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 52
Escherichia coli ECRC62 0.59 BNILDI_00575 glcB malate synthase G 0.74 BNILDI_04750 ilvD dihydroxy-acid dehydratase — —
Escherichia fergusonii Becca 0.59 EFB2_00839 Malate synthase G 0.74 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_2979 malate synthase (EC 2.3.3.9) 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase low > 68

Not shown: 0 genomes with orthologs for PP_0356 only; 56 genomes with orthologs for PP_5128 only