Conservation of cofitness between PP_0395 and PP_5041 in Pseudomonas putida KT2440

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0395 putative type IV piliation protein 1.0 PP_5041 glycogen phosphorylase 0.45 20
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.85 AO356_09685 maltodextrin phosphorylase low > 104
Pseudomonas sp. RS175 0.92 PFR28_04070 hypothetical protein 0.85 PFR28_04953 Maltodextrin phosphorylase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4633 SpoVR 0.84 Psyr_0374 Phosphorylase low > 86
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4633 SpoVR 0.84 Psyr_0374 Phosphorylase low > 86
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.85 Pf6N2E2_3816 Glycogen phosphorylase (EC 2.4.1.1) low > 103
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1194 FIG004684: SpoVR-like protein 0.85 PfGW456L13_338 Glycogen phosphorylase (EC 2.4.1.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.85 AO353_12190 maltodextrin phosphorylase low > 101
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2521 FIG004684: SpoVR-like protein 0.85 Pf1N1B4_1599 Glycogen phosphorylase (EC 2.4.1.1) low > 87
Pseudomonas simiae WCS417 0.88 PS417_25840 SpoVR family protein 0.85 PS417_01675 maltodextrin phosphorylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS27495 SpoVR family protein 0.86 PFLU_RS01730 glycogen/starch/alpha-glucan phosphorylase low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS27495 SpoVR family protein 0.86 PFLU_RS01730 glycogen/starch/alpha-glucan phosphorylase low > 109
Pseudomonas sp. S08-1 0.87 OH686_15010 SpoVR-like protein 0.76 OH686_01475 Glycogen phosphorylase low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3674 Uncharacterized conserved protein 0.74 Psest_3957 glycogen/starch/alpha-glucan phosphorylases low > 67
Shewanella amazonensis SB2B 0.69 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.39 Sama_2451 phosphorylase (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.68 HER17_RS11210 SpoVR family protein 0.47 HER17_RS01505 glycogen phosphorylase low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS11175 SpoVR family protein 0.48 DDA3937_RS19725 glycogen phosphorylase low > 74
Klebsiella michiganensis M5al 0.68 BWI76_RS17740 SpoVR family protein 0.47 BWI76_RS26195 glycogen phosphorylase 0.20 30
Dickeya dianthicola ME23 0.68 DZA65_RS11545 SpoVR family protein 0.49 DZA65_RS20910 glycogen phosphorylase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS11200 SpoVR family protein 0.48 HGI48_RS19835 glycogen phosphorylase low > 71
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_09390 SpoVR family protein 0.40 CSW01_14115 glycogen/starch/alpha-glucan phosphorylase low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2805 FIG004684: SpoVR-like protein 0.48 GFF579 Glycogen phosphorylase (EC 2.4.1.1) low > 78
Enterobacter asburiae PDN3 0.68 EX28DRAFT_0765 Uncharacterized conserved protein 0.47 EX28DRAFT_4119 glycogen/starch/alpha-glucan phosphorylases low > 76
Serratia liquefaciens MT49 0.67 IAI46_14470 SpoVR family protein 0.45 IAI46_23920 glycogen phosphorylase low > 86
Alteromonas macleodii MIT1002 0.67 MIT1002_01231 SpoVR family protein 0.43 MIT1002_01535 Maltodextrin phosphorylase low > 70
Enterobacter sp. TBS_079 0.67 MPMX20_02700 hypothetical protein 0.47 MPMX20_04310 Maltodextrin phosphorylase low > 85
Escherichia coli ECRC101 0.67 MCAODC_21885 ycgB SpoVR family protein 0.47 MCAODC_07435 glgP glycogen phosphorylase — —
Escherichia coli ECRC101 0.67 OKFHMN_28285 ycgB SpoVR family protein 0.47 OKFHMN_16905 glgP glycogen phosphorylase — —
Escherichia coli ECRC99 0.67 KEDOAH_25300 ycgB SpoVR family protein 0.47 KEDOAH_11235 glgP glycogen phosphorylase — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS07180 SpoVR family protein 0.47 ECOLIN_RS19620 glycogen phosphorylase — —
Escherichia fergusonii Becca 0.67 EFB2_02744 hypothetical protein 0.47 EFB2_00391 Maltodextrin phosphorylase low > 86
Escherichia coli ECRC102 0.67 NIAGMN_27935 ycgB SpoVR family protein 0.47 NIAGMN_14675 glgP glycogen phosphorylase — —
Escherichia coli ECRC98 0.67 JDDGAC_06225 ycgB SpoVR family protein 0.47 JDDGAC_20535 glgP glycogen phosphorylase — —
Escherichia coli ECOR38 0.67 HEPCGN_24745 ycgB SpoVR family protein 0.47 HEPCGN_15720 glgP glycogen phosphorylase low > 85
Escherichia coli BL21 0.67 ECD_01163 SpoVR family stationary phase protein 0.47 ECD_03280 glycogen phosphorylase low > 60
Escherichia coli ECRC62 0.67 BNILDI_18895 ycgB SpoVR family protein 0.47 BNILDI_02820 glgP glycogen phosphorylase — —
Escherichia coli BW25113 0.67 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.47 b3428 glgP glycogen phosphorylase (NCBI) low > 76
Escherichia coli ECOR27 0.67 NOLOHH_20730 ycgB SpoVR family protein 0.47 NOLOHH_08695 glgP glycogen phosphorylase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_02501 hypothetical protein 0.47 OHPLBJKB_00273 Maltodextrin phosphorylase low > 73
Pantoea sp. MT58 0.67 IAI47_08885 SpoVR family protein 0.47 IAI47_01700 glycogen phosphorylase low > 76
Variovorax sp. SCN45 0.67 GFF2935 FIG004684: SpoVR-like protein 0.50 GFF7301 Glycogen phosphorylase (EC 2.4.1.1) low > 127
Shewanella sp. ANA-3 0.67 Shewana3_1636 SpoVR family protein (RefSeq) 0.40 Shewana3_2932 glycogen/starch/alpha-glucan phosphorylases (RefSeq) low > 73
Rahnella sp. WP5 0.67 EX31_RS10500 SpoVR family protein 0.45 EX31_RS05005 glycogen phosphorylase low > 89
Shewanella oneidensis MR-1 0.67 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.40 SO1496 glycogen phosphorylase family protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_1831 hypothetical protein (RefSeq) 0.40 Shew_1170 glycogen/starch/alpha-glucan phosphorylase (RefSeq) low > 60
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation 0.47 H281DRAFT_03054 glycogen phosphorylase low > 103
Paraburkholderia graminis OAS925 0.66 ABIE53_002316 stage V sporulation protein R 0.47 ABIE53_005130 starch phosphorylase 0.64 27
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS11180 SpoVR family protein 0.46 BPHYT_RS29590 glycogen phosphorylase low > 109
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS07385 SpoVR family protein 0.48 QEN71_RS14305 glycogen/starch/alpha-glucan phosphorylase low > 153
Sinorhizobium meliloti 1021 0.51 SMc01265 SpoVR family protein 0.62 SMc04460 glycogen phosphorylase low > 103
Azospirillum brasilense Sp245 0.50 AZOBR_RS12645 SpoVR family protein 0.56 AZOBR_RS14740 glycogen phosphorylase low > 97
Magnetospirillum magneticum AMB-1 0.49 AMB_RS10895 SpoVR family protein 0.52 AMB_RS15415 glycogen/starch/alpha-glucan phosphorylase low > 64
Azospirillum sp. SherDot2 0.48 MPMX19_02155 hypothetical protein 0.55 MPMX19_01194 Maltodextrin phosphorylase low > 112
Rhizobium sp. OAE497 0.47 ABIE40_RS12540 SpoVR family protein 0.60 ABIE40_RS16475 glycogen/starch/alpha-glucan phosphorylase low > 107

Not shown: 9 genomes with orthologs for PP_0395 only; 8 genomes with orthologs for PP_5041 only