Conservation of cofitness between PP_4546 and PP_5028 in Pseudomonas putida KT2440

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4546 ATP-dependent helicase HrpA 1.0 PP_5028 proline iminopeptidase 0.48 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_3831 ATP-dependent helicase HrpA 0.79 Psyr_0375 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_3831 ATP-dependent helicase HrpA 0.79 Psyr_0375 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 low > 86
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.82 Pf6N2E2_3794 Proline iminopeptidase (EC 3.4.11.5) low > 103
Pseudomonas sp. RS175 0.85 PFR28_00739 hypothetical protein 0.83 PFR28_04976 Proline iminopeptidase low > 88
Pseudomonas simiae WCS417 0.85 PS417_20575 ATP-dependent helicase HrpA 0.79 PS417_01780 proline iminopeptidase low > 88
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_18225 ATP-dependent RNA helicase HrpA 0.83 AO353_12300 proline iminopeptidase low > 101
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_04280 ATP-dependent RNA helicase HrpA 0.82 AO356_09575 proline iminopeptidase low > 104
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.82 PfGW456L13_313 Proline iminopeptidase (EC 3.4.11.5) low > 87
Pseudomonas fluorescens SBW25 0.85 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.78 PFLU_RS01825 prolyl aminopeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS22265 ATP-dependent RNA helicase HrpA 0.78 PFLU_RS01825 prolyl aminopeptidase low > 109
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.81 Pf1N1B4_1575 Proline iminopeptidase (EC 3.4.11.5) low > 87
Pseudomonas sp. S08-1 0.80 OH686_05730 RNA helicase HrpA 0.79 OH686_10205 prolyl aminopeptidase low > 80
Pseudomonas stutzeri RCH2 0.78 Psest_1339 ATP-dependent helicase HrpA 0.76 Psest_3951 proline iminopeptidase, Neisseria-type subfamily low > 67
Marinobacter adhaerens HP15 0.48 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type 0.58 HP15_430 peptidase S33, proline iminopeptidase 1 low > 73
Shewanella loihica PV-4 0.48 Shew_1767 ATP-dependent helicase HrpA (RefSeq) 0.19 Shew_3544 alpha/beta hydrolase fold (RefSeq) low > 60
Shewanella oneidensis MR-1 0.48 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) 0.21 SO4400 proline iminopeptidase, putative (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.48 IAI46_13330 ATP-dependent RNA helicase HrpA 0.47 IAI46_09990 prolyl aminopeptidase low > 86
Rahnella sp. WP5 0.46 EX31_RS06495 ATP-dependent RNA helicase HrpA 0.48 EX31_RS24755 prolyl aminopeptidase low > 89
Alteromonas macleodii MIT1002 0.45 MIT1002_01685 ATP-dependent RNA helicase HrpB 0.39 MIT1002_03674 Proline iminopeptidase low > 70
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS13030 ATP-dependent helicase 0.47 RR42_RS16705 proline iminopeptidase low > 128
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS11020 ATP-dependent RNA helicase HrpA 0.47 ABZR87_RS16395 prolyl aminopeptidase low > 80
Ralstonia solanacearum PSI07 0.41 RPSI07_RS17865 ATP-dependent RNA helicase HrpA 0.47 RPSI07_RS00655 prolyl aminopeptidase low > 81
Ralstonia solanacearum GMI1000 0.41 RS_RS06270 ATP-dependent RNA helicase HrpA 0.46 RS_RS18090 prolyl aminopeptidase low > 80
Ralstonia solanacearum UW163 0.41 UW163_RS12950 ATP-dependent RNA helicase HrpA 0.47 UW163_RS23050 prolyl aminopeptidase
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA 0.47 RALBFv3_RS22505 prolyl aminopeptidase low > 76
Castellaniella sp019104865 MT123 0.40 ABCV34_RS02420 ATP-dependent RNA helicase HrpA 0.47 ABCV34_RS09000 prolyl aminopeptidase low > 48
Paraburkholderia graminis OAS925 0.40 ABIE53_002813 ATP-dependent helicase HrpA 0.21 ABIE53_005484 proline iminopeptidase
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS17315 ATP-dependent helicase 0.47 HSERO_RS15995 proline iminopeptidase low > 78
Variovorax sp. OAS795 0.39 ABID97_RS16615 ATP-dependent RNA helicase HrpA 0.29 ABID97_RS12710 alpha/beta fold hydrolase
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS19720 ATP-dependent RNA helicase HrpA 0.51 ABZR86_RS09625 prolyl aminopeptidase low > 74
Variovorax sp. SCN45 0.38 GFF247 ATP-dependent helicase HrpA 0.47 GFF2633 Proline iminopeptidase (EC 3.4.11.5) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.19 GFF5402 Proline iminopeptidase (EC 3.4.11.5) low > 90
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS05625 ATP-dependent RNA helicase HrpA 0.19 QEN71_RS30235 alpha/beta fold hydrolase low > 153
Lysobacter sp. OAE881 0.37 ABIE51_RS05155 ATP-dependent RNA helicase HrpA 0.51 ABIE51_RS05500 prolyl aminopeptidase low > 62
Rhodanobacter denitrificans MT42 0.36 LRK55_RS12420 ATP-dependent RNA helicase HrpA 0.52 LRK55_RS02925 prolyl aminopeptidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS12715 ATP-dependent RNA helicase HrpA 0.52 LRK54_RS03175 prolyl aminopeptidase low > 59
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_02155 hrpA ATP-dependent RNA helicase HrpA 0.51 OKGIIK_10045 pip prolyl aminopeptidase low > 52

Not shown: 31 genomes with orthologs for PP_4546 only; 17 genomes with orthologs for PP_5028 only