Conservation of cofitness between PP_2137 and PP_4699 in Pseudomonas putida KT2440

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2137 beta-ketoadipyl CoA thiolase, beta component 1.0 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.41 13
Pseudomonas sp. RS175 0.96 PFR28_01111 3-ketoacyl-CoA thiolase 0.82 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_3289 3-ketoacyl-CoA thiolase 0.85 Psyr_0828 ketopantoate hydroxymethyltransferase low > 86
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_4040 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.84 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_3289 3-ketoacyl-CoA thiolase 0.85 Psyr_0828 ketopantoate hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_00505 3-ketoacyl-CoA thiolase 0.84 AO353_14385 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_02325 3-ketoacyl-CoA thiolase 0.83 AO356_16060 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 104
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA 0.85 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.45 26
Pseudomonas fluorescens SBW25 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA 0.85 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.73 54
Pseudomonas simiae WCS417 0.94 PS417_07580 3-ketoacyl-CoA thiolase 0.86 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2289 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.83 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) — —
Pseudomonas sp. S08-1 0.93 OH686_21930 acetyl-CoA C-acyltransferase FadA 0.82 OH686_17245 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_3904 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.83 Pf1N1B4_2854 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) — —
Pseudomonas stutzeri RCH2 0.90 Psest_2653 fatty oxidation complex, beta subunit FadA 0.78 Psest_0996 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Marinobacter adhaerens HP15 0.72 HP15_1513 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) 0.60 HP15_324 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0355 fatty oxidation complex, beta subunit FadA 0.56 B158DRAFT_0061 ketopantoate hydroxymethyltransferase (EC 2.1.2.11) — —
Shewanella loihica PV-4 0.66 Shew_0018 fadA 3-ketoacyl-CoA thiolase (RefSeq) 0.59 Shew_3133 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.66 Sama_0031 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) 0.58 Sama_0776 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) — —
Alteromonas macleodii MIT1002 0.66 MIT1002_00574 3-ketoacyl-CoA thiolase 0.58 MIT1002_03694 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Shewanella sp. ANA-3 0.65 Shewana3_0023 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) 0.60 Shewana3_3408 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.65 SO0020 fadA fatty oxidation complex, beta subunit (NCBI ptt file) 0.61 SO0870 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.65 IAI46_01125 acetyl-CoA C-acyltransferase FadA 0.59 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Pantoea sp. MT58 0.65 IAI47_18235 acetyl-CoA C-acyltransferase FadA 0.55 IAI47_15655 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4509 fatty oxidation complex, beta subunit FadA 0.58 EX28DRAFT_3730 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Acinetobacter radioresistens SK82 0.64 MPMX26_00225 3-ketoacyl-CoA thiolase 0.57 MPMX26_00545 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 36
Pectobacterium carotovorum WPP14 0.64 HER17_RS20555 acetyl-CoA C-acyltransferase FadA 0.57 HER17_RS05560 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_04437 3-ketoacyl-CoA thiolase 0.59 MPMX20_00827 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Escherichia coli Nissle 1917 0.64 ECOLIN_RS22165 acetyl-CoA C-acyltransferase FadA 0.59 ECOLIN_RS00745 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF272 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.56 GFF91 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 78
Rahnella sp. WP5 0.64 EX31_RS14570 acetyl-CoA C-acyltransferase FadA 0.58 EX31_RS03280 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 89
Escherichia coli ECRC102 0.63 NIAGMN_12005 fadA acetyl-CoA C-acyltransferase FadA 0.58 NIAGMN_08250 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC99 0.63 KEDOAH_13900 fadA acetyl-CoA C-acyltransferase FadA 0.58 KEDOAH_17755 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC101 0.63 MCAODC_04755 fadA acetyl-CoA C-acyltransferase FadA 0.58 MCAODC_00915 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC98 0.63 JDDGAC_17875 fadA acetyl-CoA C-acyltransferase FadA 0.58 JDDGAC_13995 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC101 0.63 OKFHMN_14250 fadA acetyl-CoA C-acyltransferase FadA 0.58 OKFHMN_10400 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC62 0.63 BNILDI_05150 fadA acetyl-CoA C-acyltransferase FadA 0.59 BNILDI_08925 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia fergusonii Becca 0.63 EFB2_04772 3-ketoacyl-CoA thiolase FadA 0.59 EFB2_03910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Klebsiella michiganensis M5al 0.63 BWI76_RS01360 acetyl-CoA C-acyltransferase FadA 0.57 BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 92
Escherichia coli BL21 0.63 ECD_03736 3-ketoacyl-CoA thiolase (thiolase I) 0.59 ECD_00133 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04208 3-ketoacyl-CoA thiolase FadA 0.59 OHPLBJKB_03527 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 73
Escherichia coli ECOR38 0.63 HEPCGN_12880 fadA acetyl-CoA C-acyltransferase FadA 0.59 HEPCGN_08375 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Escherichia coli BW25113 0.63 b3845 fadA acetyl-CoA acetyltransferase (NCBI) 0.59 b0134 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) low > 76
Escherichia coli ECOR27 0.63 NOLOHH_06380 fadA acetyl-CoA C-acyltransferase FadA 0.59 NOLOHH_02745 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 57
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_13975 acetyl-CoA C-acyltransferase FadA 0.56 CSW01_03135 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Dickeya dadantii 3937 0.60 DDA3937_RS20255 acetyl-CoA C-acyltransferase FadA 0.58 DDA3937_RS15955 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Dickeya dianthicola ME23 0.60 DZA65_RS01030 acetyl-CoA C-acyltransferase FadA 0.57 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Dickeya dianthicola 67-19 0.60 HGI48_RS00970 acetyl-CoA C-acyltransferase FadA 0.58 HGI48_RS16070 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 71
Azospirillum brasilense Sp245 0.39 AZOBR_RS20220 acetyl-CoA acetyltransferase 0.39 AZOBR_RS06445 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 97
Rhodospirillum rubrum S1H 0.38 Rru_A1310 Acetyl-CoA C-acyltransferase (NCBI) 0.31 Rru_A3321 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) — —
Variovorax sp. SCN45 0.38 GFF2768 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16) 0.47 GFF2579 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 127
Variovorax sp. OAS795 0.38 ABID97_RS20240 thiolase family protein 0.46 ABID97_RS07435 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.29 37
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2741.1 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.52 Xcc-8004.3052.1 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) — —
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS02515 acetyl-CoA acetyltransferase 0.47 RR42_RS17250 3-methyl-2-oxobutanoate hydroxymethyltransferase — —

Not shown: 0 genomes with orthologs for PP_2137 only; 46 genomes with orthologs for PP_4699 only