Conservation of cofitness between PP_1860 and PP_4591 in Pseudomonas putida KT2440

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1860 Organic hydroperoxide resistance transcriptional regulator 1.0 PP_4591 Ribonuclease D 0.33 18
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_19090 MarR family transcriptional regulator 0.81 AO353_17855 ribonuclease D low > 101
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_275 Organic hydroperoxide resistance transcriptional regulator 0.82 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) low > 87
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_03145 MarR family transcriptional regulator 0.81 AO356_04420 ribonuclease D — —
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS08445 MarR family transcriptional regulator 0.81 PFLU_RS07465 ribonuclease D low > 109
Pseudomonas fluorescens SBW25 0.76 PFLU_RS08445 MarR family transcriptional regulator 0.81 PFLU_RS07465 ribonuclease D low > 109
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_2458 Organic hydroperoxide resistance transcriptional regulator 0.81 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) — —
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_2237 Organic hydroperoxide resistance transcriptional regulator 0.82 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) low > 87
Pseudomonas sp. RS175 0.75 PFR28_00973 Organic hydroperoxide resistance transcriptional regulator 0.82 PFR28_00712 Ribonuclease D — —
Pseudomonas simiae WCS417 0.73 PS417_08495 MarR family transcriptional regulator 0.82 PS417_07375 ribonuclease D — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3626 transcriptional regulator, MarR family 0.80 Psyr_1563 Ribonuclease D low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3626 transcriptional regulator, MarR family 0.80 Psyr_1563 Ribonuclease D low > 86
Pseudomonas sp. S08-1 0.68 OH686_17660 Organic hydroperoxide resistance transcriptional regulator 0.77 OH686_05315 ribonuclease D — —
Rhizobium sp. OAE497 0.55 ABIE40_RS13610 MarR family transcriptional regulator 0.27 ABIE40_RS06640 ribonuclease D — —
Marinobacter adhaerens HP15 0.52 HP15_2792 transcriptional regulator MarR family protein 0.24 HP15_1882 ribonuclease D low > 73
Pectobacterium carotovorum WPP14 0.52 HER17_RS06400 MarR family transcriptional regulator 0.27 HER17_RS11270 ribonuclease D low > 75
Dickeya dianthicola ME23 0.51 DZA65_RS19880 MarR family transcriptional regulator 0.28 DZA65_RS11600 ribonuclease D low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS18745 MarR family transcriptional regulator 0.28 HGI48_RS11255 ribonuclease D low > 71
Dickeya dadantii 3937 0.50 DDA3937_RS18760 MarR family transcriptional regulator 0.29 DDA3937_RS11220 ribonuclease D low > 74
Enterobacter sp. TBS_079 0.50 MPMX20_00654 Organic hydroperoxide resistance transcriptional regulator 0.30 MPMX20_02710 Ribonuclease D low > 85
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.339.1 Organic hydroperoxide resistance transcriptional regulator 0.19 Xcc-8004.2248.1 Ribonuclease D (EC 3.1.26.3) low > 74
Erwinia tracheiphila SCR3 0.47 LU632_RS00235 MarR family transcriptional regulator 0.27 LU632_RS13130 rnd ribonuclease D low > 74
Serratia liquefaciens MT49 0.47 IAI46_00420 MarR family transcriptional regulator 0.29 IAI46_14530 ribonuclease D low > 86
Rahnella sp. WP5 0.47 EX31_RS05595 MarR family transcriptional regulator 0.29 EX31_RS10595 ribonuclease D low > 89
Pantoea sp. MT58 0.46 IAI47_18675 MarR family transcriptional regulator 0.28 IAI47_08840 ribonuclease D low > 76
Azospirillum brasilense Sp245 0.46 AZOBR_RS23440 MarR family transcriptional regulator 0.26 AZOBR_RS16220 ribonuclease D low > 97
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3564 Transcriptional regulators 0.31 EX28DRAFT_0755 ribonuclease D low > 76
Bosea sp. OAE506 0.45 ABIE41_RS12405 MarR family transcriptional regulator 0.25 ABIE41_RS16115 ribonuclease D — —
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_00962 MarR-family transcriptional regulator 0.27 CCNA_01776 ribonuclease D — —
Caulobacter crescentus NA1000 0.45 CCNA_00962 MarR-family transcriptional regulator 0.27 CCNA_01776 ribonuclease D — —
Shewanella amazonensis SB2B 0.45 Sama_0628 MarR family transcriptional regulator (RefSeq) 0.30 Sama_1933 ribonuclease D (RefSeq) low > 62
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS15735 MarR family transcriptional regulator 0.20 LRK54_RS16010 ribonuclease D low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS15485 MarR family transcriptional regulator 0.20 LRK55_RS15770 ribonuclease D low > 63
Azospirillum sp. SherDot2 0.44 MPMX19_00748 Organic hydroperoxide resistance transcriptional regulator 0.24 MPMX19_00986 Ribonuclease D low > 112
Agrobacterium fabrum C58 0.44 Atu5064 MarR family transcriptional regulator 0.26 Atu1151 ribonuclease D — —
Sinorhizobium meliloti 1021 0.43 SMc01945 transcriptional regulator 0.25 SMc00622 ribonuclease D protein — —
Shewanella sp. ANA-3 0.43 Shewana3_3311 MarR family transcriptional regulator (RefSeq) 0.27 Shewana3_2385 ribonuclease D (RefSeq) low > 73
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_0852 Transcriptional regulators 0.27 Ga0059261_0222 ribonuclease D — —
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS13500 MarR family transcriptional regulator 0.26 A4249_RS08205 ribonuclease D — —
Rhodopseudomonas palustris CGA009 0.41 TX73_004270 MarR family transcriptional regulator 0.25 TX73_015755 ribonuclease D low > 86
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_19135 MarR family transcriptional regulator 0.29 CSW01_09900 ribonuclease D low > 62
Phaeobacter inhibens DSM 17395 0.37 PGA1_c34090 organic hydroperoxide resistance transcriptional regulator 0.24 PGA1_c13290 putative ribonuclease D — —
Alteromonas macleodii MIT1002 0.33 MIT1002_00888 Organic hydroperoxide resistance transcriptional regulator 0.29 MIT1002_02587 Ribonuclease D low > 70

Not shown: 19 genomes with orthologs for PP_1860 only; 25 genomes with orthologs for PP_4591 only