Conservation of cofitness between PP_0760 and PP_4546 in Pseudomonas putida KT2440

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0760 conserved membrane protein of unknown function 1.0 PP_4546 ATP-dependent helicase HrpA 0.29 18
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_14990 hypothetical protein 0.85 AO353_18225 ATP-dependent RNA helicase HrpA low > 101
Pseudomonas fluorescens SBW25 0.84 PFLU_RS04565 TMEM165/GDT1 family protein 0.85 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS04565 TMEM165/GDT1 family protein 0.85 PFLU_RS22265 ATP-dependent RNA helicase HrpA low > 109
Pseudomonas simiae WCS417 0.84 PS417_04520 membrane protein 0.85 PS417_20575 ATP-dependent helicase HrpA — —
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2952 Probable transmembrane protein 0.85 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0985 Protein of unknown function UPF0016 0.85 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0985 Protein of unknown function UPF0016 0.85 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3248 Probable transmembrane protein 0.85 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 103
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_06945 hypothetical protein 0.85 AO356_04280 ATP-dependent RNA helicase HrpA — —
Pseudomonas sp. RS175 0.80 PFR28_03624 Putative manganese exporter 0.85 PFR28_00739 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_1615 Probable transmembrane protein 0.85 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 87
Pseudomonas sp. S08-1 0.72 OH686_06355 Putative transmembrane protein 0.80 OH686_05730 RNA helicase HrpA — —
Pseudomonas stutzeri RCH2 0.64 Psest_3226 Predicted membrane protein 0.78 Psest_1339 ATP-dependent helicase HrpA low > 67
Acidovorax sp. GW101-3H11 0.55 Ac3H11_4276 Probable transmembrane protein 0.38 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. low > 79
Ralstonia solanacearum GMI1000 0.54 RS_RS10535 UPF0016 domain-containing protein 0.41 RS_RS06270 ATP-dependent RNA helicase HrpA — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS14145 UPF0016 domain-containing protein 0.41 RPSI07_RS17865 ATP-dependent RNA helicase HrpA — —
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS15065 TMEM165/GDT1 family protein 0.41 ABZR87_RS11020 ATP-dependent RNA helicase HrpA low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF5195 Probable transmembrane protein 0.38 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. — —
Dechlorosoma suillum PS 0.53 Dsui_3069 putative membrane protein 0.41 Dsui_1373 ATP-dependent helicase HrpA low > 51
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS03795 TMEM165/GDT1 family protein 0.37 QEN71_RS05625 ATP-dependent RNA helicase HrpA — —
Paraburkholderia graminis OAS925 0.52 ABIE53_003214 putative Ca2+/H+ antiporter (TMEM165/GDT1 family) 0.40 ABIE53_002813 ATP-dependent helicase HrpA — —
Ralstonia solanacearum UW163 0.52 UW163_RS10560 UPF0016 domain-containing protein 0.41 UW163_RS12950 ATP-dependent RNA helicase HrpA — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS03165 UPF0016 domain-containing protein 0.41 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA — —
Shewanella loihica PV-4 0.51 Shew_3189 hypothetical protein (RefSeq) 0.48 Shew_1767 ATP-dependent helicase HrpA (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_00110 hypothetical protein 0.47 CSW01_06950 ATP-dependent RNA helicase HrpA low > 62
Variovorax sp. SCN45 0.50 GFF3266 Putative transmembrane protein 0.38 GFF247 ATP-dependent helicase HrpA low > 127
Variovorax sp. OAS795 0.50 ABID97_RS02605 TMEM165/GDT1 family protein 0.39 ABID97_RS16615 ATP-dependent RNA helicase HrpA 0.39 29
Shewanella amazonensis SB2B 0.49 Sama_2940 hypothetical protein (RefSeq) 0.47 Sama_1619 ATP-dependent helicase HrpA (RefSeq) low > 62
Lysobacter sp. OAE881 0.49 ABIE51_RS16420 TMEM165/GDT1 family protein 0.37 ABIE51_RS05155 ATP-dependent RNA helicase HrpA low > 62
Castellaniella sp019104865 MT123 0.47 ABCV34_RS03705 TMEM165/GDT1 family protein 0.40 ABCV34_RS02420 ATP-dependent RNA helicase HrpA low > 48
Shewanella sp. ANA-3 0.47 Shewana3_0909 hypothetical protein (RefSeq) 0.48 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO1071 conserved hypothetical protein (NCBI ptt file) 0.48 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.45 HP15_3823 uncharacterized protein family UPF0016-like protein 0.48 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type low > 73
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS33355 membrane protein 0.42 RR42_RS13030 ATP-dependent helicase low > 128
Acinetobacter radioresistens SK82 0.44 MPMX26_02923 Putative manganese exporter 0.37 MPMX26_02008 hypothetical protein low > 36

Not shown: 7 genomes with orthologs for PP_0760 only; 33 genomes with orthologs for PP_4546 only