| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4129 | | NADH:ubiquinone oxidoreductase, membrane subunit L | 1.0 | PP_4130 | | NADH:ubiquinone oxidoreductase, membrane subunit M | 0.72 | 5 |
| Pseudomonas sp. RS175 | 0.93 | PFR28_02637 | | NADH-quinone oxidoreductase subunit L | 0.86 | PFR28_02638 | | NADH-quinone oxidoreductase subunit M | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS18665 | | NADH-quinone oxidoreductase subunit L | 0.86 | PFLU_RS18670 | | NADH-quinone oxidoreductase subunit M | 0.71 | 7 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS18665 | | NADH-quinone oxidoreductase subunit L | 0.86 | PFLU_RS18670 | | NADH-quinone oxidoreductase subunit M | 0.89 | 1 |
| Pseudomonas simiae WCS417 | 0.91 | PS417_16625 | | NADH-quinone oxidoreductase subunit L | 0.86 | PS417_16630 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_27790 | | NADH-quinone oxidoreductase subunit L | 0.85 | AO353_27795 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2623 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.86 | PfGW456L13_2622 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_22020 | | NADH-quinone oxidoreductase subunit L | 0.87 | AO356_22015 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.89 | Pf6N2E2_267 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.87 | Pf6N2E2_266 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.88 | Pf1N1B4_4030 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.84 | Pf1N1B4_4029 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.73 | 4 |
| Pseudomonas syringae pv. syringae B728a | 0.87 | Psyr_3207 | | NADH dehydrogenase subunit L | 0.83 | Psyr_3208 | | NADH dehydrogenase subunit M | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.87 | Psyr_3207 | | NADH dehydrogenase subunit L | 0.83 | Psyr_3208 | | NADH dehydrogenase subunit M | — | — |
| Pseudomonas sp. S08-1 | 0.76 | OH686_00105 | | NADH-ubiquinone oxidoreductase chain L | 0.81 | OH686_00100 | | NADH-ubiquinone oxidoreductase chain M | 0.93 | 6 |
| Shewanella oneidensis MR-1 | 0.69 | SO1011 | nuoL | NADH dehydrogenase I, L subunit (NCBI ptt file) | 0.68 | SO1010 | nuoM | NADH dehydrogenase I, M subunit (NCBI ptt file) | 0.91 | 5 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.67 | GFF1881 | | NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | 0.72 | GFF1880 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | 0.90 | 8 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS07175 | | NADH-quinone oxidoreductase subunit L | 0.72 | HER17_RS07180 | | NADH-quinone oxidoreductase subunit M | 0.68 | 52 |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_14510 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | NOLOHH_14515 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Pantoea sp. MT58 | 0.67 | IAI47_06410 | | NADH-quinone oxidoreductase subunit L | 0.73 | IAI47_06415 | | NADH-quinone oxidoreductase subunit M | 0.93 | 3 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS08015 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | LU632_RS08020 | nuoM | NADH-quinone oxidoreductase subunit M | 0.96 | 7 |
| Escherichia coli BL21 | 0.67 | ECD_02203 | | NADH:ubiquinone oxidoreductase, membrane subunit L | 0.73 | ECD_02202 | | NADH:ubiquinone oxidoreductase, membrane subunit M | 0.93 | 3 |
| Enterobacter sp. TBS_079 | 0.67 | MPMX20_03208 | | NADH-quinone oxidoreductase subunit L | 0.72 | MPMX20_03207 | | NADH-quinone oxidoreductase subunit M | 0.88 | 5 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_0332 | | proton-translocating NADH-quinone oxidoreductase, chain L | 0.72 | EX28DRAFT_0333 | | proton-translocating NADH-quinone oxidoreductase, chain M | 0.95 | 2 |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_22095 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | HEPCGN_22100 | nuoM | NADH-quinone oxidoreductase subunit M | 0.92 | 4 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_01428 | | NADH-quinone oxidoreductase subunit L | 0.73 | OHPLBJKB_01429 | | NADH-quinone oxidoreductase subunit M | 0.60 | 3 |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_20660 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | NIAGMN_20665 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS13235 | | NADH-quinone oxidoreductase subunit L | 0.73 | ECOLIN_RS13230 | | NADH-quinone oxidoreductase subunit M | 0.91 | 9 |
| Escherichia coli ECRC101 | 0.67 | OKFHMN_22890 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | OKFHMN_22895 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_26855 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | JDDGAC_26860 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Escherichia fergusonii Becca | 0.67 | EFB2_01581 | | NADH-quinone oxidoreductase subunit L | 0.73 | EFB2_01582 | | NADH-quinone oxidoreductase subunit M | low | > 86 |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_05305 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | KEDOAH_05300 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Escherichia coli ECRC101 | 0.67 | MCAODC_13930 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | MCAODC_13935 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Escherichia coli ECRC62 | 0.67 | BNILDI_13430 | nuoL | NADH-quinone oxidoreductase subunit L | 0.73 | BNILDI_13435 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Escherichia coli BW25113 | 0.67 | b2278 | nuoL | NADH dehydrogenase subunit L (NCBI) | 0.73 | b2277 | nuoM | NADH dehydrogenase subunit M (NCBI) | 0.95 | 2 |
| Rahnella sp. WP5 | 0.67 | EX31_RS19385 | | NADH-quinone oxidoreductase subunit L | 0.73 | EX31_RS19380 | | NADH-quinone oxidoreductase subunit M | 0.80 | 4 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_17660 | | NADH-quinone oxidoreductase subunit L | 0.73 | IAI46_17655 | | NADH-quinone oxidoreductase subunit M | 0.41 | 52 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS20140 | | NADH-quinone oxidoreductase subunit L | 0.72 | BWI76_RS20135 | | NADH-quinone oxidoreductase subunit M | 0.82 | 4 |
| Dickeya dianthicola ME23 | 0.65 | DZA65_RS14935 | | NADH-quinone oxidoreductase subunit L | 0.72 | DZA65_RS14930 | | NADH-quinone oxidoreductase subunit M | — | — |
| Dickeya dadantii 3937 | 0.65 | DDA3937_RS14285 | | NADH-quinone oxidoreductase subunit L | 0.71 | DDA3937_RS14280 | | NADH-quinone oxidoreductase subunit M | — | — |
| Dickeya dianthicola 67-19 | 0.65 | HGI48_RS14260 | | NADH-quinone oxidoreductase subunit L | 0.72 | HGI48_RS14255 | | NADH-quinone oxidoreductase subunit M | low | > 71 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_02545 | | NADH-quinone oxidoreductase subunit L | 0.58 | MPMX26_02544 | | NADH-quinone oxidoreductase subunit M | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_04220 | | NADH-quinone oxidoreductase subunit L | 0.49 | CA264_04215 | | NADH-quinone oxidoreductase subunit M | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.32 | CA265_RS23590 | | NADH-quinone oxidoreductase subunit L | 0.27 | CA265_RS23595 | | NADH-quinone oxidoreductase subunit M | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.31 | ABZR88_RS17115 | | NADH-quinone oxidoreductase subunit L | 0.27 | ABZR88_RS15725 | | NuoM family protein | — | — |
| Azospirillum brasilense Sp245 | 0.29 | AZOBR_RS07220 | | NADH:ubiquinone oxidoreductase subunit L | 0.35 | AZOBR_RS07225 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Azospirillum sp. SherDot2 | 0.29 | MPMX19_01735 | | NADH-quinone oxidoreductase subunit L | 0.35 | MPMX19_01734 | | NADH-quinone oxidoreductase subunit M | — | — |
| Magnetospirillum magneticum AMB-1 | 0.29 | AMB_RS13955 | | NADH-quinone oxidoreductase subunit L | 0.32 | AMB_RS13950 | | NADH-quinone oxidoreductase subunit M | — | — |
| Sinorhizobium meliloti 1021 | 0.28 | SMc01925 | | NADH dehydrogenase subunit L | 0.34 | SMc01926 | | NADH dehydrogenase subunit M | — | — |
| Variovorax sp. OAS795 | 0.28 | ABID97_RS20440 | | NADH-quinone oxidoreductase subunit L | 0.30 | ABID97_RS20435 | | NADH-quinone oxidoreductase subunit M | — | — |
| Rhodospirillum rubrum S1H | 0.28 | Rru_A1566 | | NADH-plastoquinone oxidoreductase, chain 5 (NCBI) | 0.33 | Rru_A1567 | | Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_1327 | | proton-translocating NADH-quinone oxidoreductase, chain L (RefSeq) | 0.31 | Dshi_1328 | | proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq) | — | — |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS07240 | | NADH-quinone oxidoreductase subunit L | 0.32 | ABIE40_RS07245 | | NADH-quinone oxidoreductase subunit M | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_0698 | | NADH dehydrogenase subunit L (EC 1.6.5.3) | 0.30 | Ga0059261_0697 | | proton-translocating NADH-quinone oxidoreductase, chain M | — | — |
| Mycobacterium tuberculosis H37Rv | 0.25 | Rv3156 | | Probable NADH dehydrogenase I (chain L) NuoL (NADH-ubiquinone oxidoreductase chain L) | 0.25 | Rv3157 | | Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M) | 0.85 | 12 |
| Bosea sp. OAE506 | 0.25 | ABIE41_RS17885 | | NADH-quinone oxidoreductase subunit L | 0.31 | ABIE41_RS17880 | | NADH-quinone oxidoreductase subunit M | — | — |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS09035 | | NADH-quinone oxidoreductase subunit L | 0.22 | HMPREF1181_RS09040 | | NADH-quinone oxidoreductase subunit M | 0.67 | 2 |
| Bacteroides ovatus ATCC 8483 | 0.24 | BACOVA_04855 | | proton-translocating NADH-quinone oxidoreductase, chain L | 0.22 | BACOVA_04854 | | proton-translocating NADH-quinone oxidoreductase, chain M | 0.83 | 2 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.23 | BT4060 | | NADH dehydrogenase I, chain L (NCBI ptt file) | 0.22 | BT4059 | | NADH dehydrogenase I, chain M (NCBI ptt file) | 0.68 | 2 |
| Synechococcus elongatus PCC 7942 | 0.23 | Synpcc7942_1977 | ndhF1 | NAD(P)H-quinone oxidoreductase subunit F | 0.29 | Synpcc7942_1976 | ndhD | NAD(P)H-quinone oxidoreductase subunit D | low | > 38 |
| Phocaeicola vulgatus CL09T03C04 | 0.23 | HMPREF1058_RS13300 | | NADH-quinone oxidoreductase subunit L | 0.22 | HMPREF1058_RS13295 | | NADH-quinone oxidoreductase subunit M | 0.73 | 2 |
| Phocaeicola dorei CL03T12C01 | 0.23 | ABI39_RS08505 | | NADH-quinone oxidoreductase subunit L | 0.22 | ABI39_RS08500 | | NADH-quinone oxidoreductase subunit M | 0.36 | 29 |
Not shown: 0 genomes with orthologs for PP_4129 only; 29 genomes with orthologs for PP_4130 only