Conservation of cofitness between PP_1898 and PP_4008 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1898 MotA/TolQ/ExbB proton channel family protein 1.0 PP_4008 ATP-dependent serine protease 0.37 14
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_20065 biopolymer transporter ExbB 0.94 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_5931 MotA/TolQ/ExbB proton channel family protein 0.94 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_472 MotA/TolQ/ExbB proton channel family protein 0.94 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_2084 MotA/TolQ/ExbB proton channel family protein 0.94 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_01460 biopolymer transporter ExbB 0.94 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens SBW25 0.79 PFLU_RS18395 MotA/TolQ/ExbB proton channel family protein 0.93 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS18395 MotA/TolQ/ExbB proton channel family protein 0.93 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas sp. RS175 0.78 PFR28_03030 Tol-Pal system protein TolQ 0.95 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas simiae WCS417 0.78 PS417_16345 biopolymer transporter ExbB 0.94 PS417_16510 Clp protease ClpX — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_1633 MotA/TolQ/ExbB proton channel 0.93 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_1633 MotA/TolQ/ExbB proton channel 0.93 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pseudomonas sp. S08-1 0.76 OH686_22050 MotA/TolQ/ExbB proton channel family protein 0.91 OH686_00235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Pseudomonas stutzeri RCH2 0.72 Psest_1672 Biopolymer transport proteins 0.92 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA — —
Marinobacter adhaerens HP15 0.59 HP15_2066 MotA/TolQ/ExbB proton channel family protein 0.79 HP15_2080 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_1596 Biopolymer transport proteins 0.68 B158DRAFT_1505 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 40
Dechlorosoma suillum PS 0.41 Dsui_3267 biopolymer transport protein 0.66 Dsui_0009 ATP-dependent Clp protease ATP-binding subunit clpA — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS05855 flagellar motor protein MotA 0.64 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein — —
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS16210 MotA/TolQ/ExbB proton channel family protein 0.67 LRK54_RS00420 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS15960 MotA/TolQ/ExbB proton channel family protein 0.67 LRK55_RS00160 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Lysobacter sp. OAE881 0.37 ABIE51_RS12485 MotA/TolQ/ExbB proton channel family protein 0.67 ABIE51_RS11490 ATP-dependent Clp protease ATP-binding subunit ClpA 0.30 50
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_08445 tolQ biopolymer transporter ExbB 0.68 OKGIIK_06890 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 52
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2470.1 Ferric siderophore transport system, biopolymer transport protein ExbB 0.66 Xcc-8004.2754.1 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS03470 flagellar motor protein MotA 0.64 RR42_RS17105 Clp protease ClpX low > 128
Ralstonia solanacearum PSI07 0.32 RPSI07_RS12230 MotA/TolQ/ExbB proton channel family protein 0.64 RPSI07_RS12575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 81
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS00715 MotA/TolQ/ExbB proton channel family protein 0.65 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS05065 MotA/TolQ/ExbB proton channel family protein 0.64 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum UW163 0.32 UW163_RS08560 MotA/TolQ/ExbB proton channel family protein 0.64 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum GMI1000 0.32 RS_RS12675 MotA/TolQ/ExbB proton channel family protein 0.65 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Acinetobacter radioresistens SK82 0.32 MPMX26_01217 Biopolymer transport protein ExbB 0.64 MPMX26_01284 ATP-dependent Clp protease ATP-binding subunit ClpA low > 36
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS06300 MotA/TolQ/ExbB proton channel family protein 0.69 ABZR86_RS02200 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Variovorax sp. SCN45 0.31 GFF350 Ferric siderophore transport system, biopolymer transport protein ExbB 0.64 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA low > 127
Variovorax sp. OAS795 0.31 ABID97_RS16950 MotA/TolQ/ExbB proton channel family protein 0.63 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA 0.55 27
Acidovorax sp. GW101-3H11 0.29 Ac3H11_2383 Ferric siderophore transport system, biopolymer transport protein ExbB 0.64 Ac3H11_2456 ATP-dependent Clp protease ATP-binding subunit ClpA low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF4510 Ferric siderophore transport system, biopolymer transport protein ExbB 0.64 GFF4521 ATP-dependent Clp protease ATP-binding subunit ClpA low > 90
Castellaniella sp019104865 MT123 0.28 ABCV34_RS05335 MotA/TolQ/ExbB proton channel family protein 0.62 ABCV34_RS05305 ATP-dependent Clp protease ATP-binding subunit ClpA low > 48
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS08320 MotA/TolQ/ExbB proton channel family protein 0.40 HMPREF1058_RS09040 AAA family ATPase low > 67

Not shown: 8 genomes with orthologs for PP_1898 only; 52 genomes with orthologs for PP_4008 only