| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4722 | | Transcription elongation factor GreA | 1.0 | PP_2475 | | Transcriptional regulator, TetR family | 0.40 | 18 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.82 | Psyr_4190 | | transcription elongation factor GreA | 0.44 | Psyr_2933 | | transcriptional regulator, TetR family | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.82 | Psyr_4190 | | transcription elongation factor GreA | 0.44 | Psyr_2933 | | transcriptional regulator, TetR family | — | — |
| Pseudomonas sp. S08-1 | 0.81 | OH686_17085 | | Transcription elongation factor GreA | 0.21 | OH686_06240 | | Transcriptional regulator, AcrR family | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.80 | PFLU_RS25875 | | transcription elongation factor GreA | 0.45 | PFLU_RS15495 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.80 | PFLU_RS25875 | | transcription elongation factor GreA | 0.45 | PFLU_RS15495 | | TetR/AcrR family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.79 | PS417_24035 | | transcription elongation factor GreA | 0.43 | PS417_11180 | | TetR family transcriptional regulator | — | — |
| Pseudomonas stutzeri RCH2 | 0.77 | Psest_0969 | | transcription elongation factor GreA | 0.23 | Psest_0932 | | Transcriptional regulator | low | > 67 |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_1017 | | transcription elongation factor GreA (RefSeq) | 0.50 | Shewana3_0262 | | TetR family transcriptional regulator (RefSeq) | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF2922 | | Transcription elongation factor GreA | 0.41 | GFF3625 | | Transcriptional regulator, TetR family | low | > 78 |
| Escherichia coli ECRC62 | 0.60 | BNILDI_01690 | greA | transcription elongation factor GreA | 0.41 | BNILDI_16750 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli BW25113 | 0.60 | b3181 | greA | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | 0.41 | b1649 | ydhM | predicted DNA-binding transcriptional regulator (RefSeq) | — | — |
| Escherichia coli ECRC101 | 0.60 | MCAODC_08565 | greA | transcription elongation factor GreA | 0.42 | MCAODC_17970 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_00519 | | Transcription elongation factor GreA | 0.41 | OHPLBJKB_02076 | | HTH-type transcriptional repressor NemR | low | > 73 |
| Escherichia coli ECOR38 | 0.60 | HEPCGN_16920 | greA | transcription elongation factor GreA | 0.43 | HEPCGN_05825 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli ECRC102 | 0.60 | NIAGMN_15805 | greA | transcription elongation factor GreA | 0.43 | NIAGMN_00625 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli BL21 | 0.60 | ECD_03046 | | transcript cleavage factor | 0.41 | ECD_01619 | | transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated | low | > 60 |
| Escherichia coli ECRC101 | 0.60 | OKFHMN_18045 | greA | transcription elongation factor GreA | 0.43 | OKFHMN_27440 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia fergusonii Becca | 0.60 | EFB2_00642 | | Transcription elongation factor GreA | 0.41 | EFB2_02343 | | HTH-type transcriptional repressor NemR | low | > 86 |
| Escherichia coli ECOR27 | 0.60 | NOLOHH_09845 | greA | transcription elongation factor GreA | 0.41 | NOLOHH_17960 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli Nissle 1917 | 0.60 | ECOLIN_RS18320 | | transcription elongation factor GreA | 0.41 | ECOLIN_RS09195 | | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli ECRC99 | 0.60 | KEDOAH_10105 | greA | transcription elongation factor GreA | 0.43 | KEDOAH_00670 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Escherichia coli ECRC98 | 0.60 | JDDGAC_21670 | greA | transcription elongation factor GreA | 0.43 | JDDGAC_02030 | nemR | DNA-binding transcriptional regulator NemR | — | — |
| Shewanella oneidensis MR-1 | 0.60 | SO1191 | greA | transcription elongation factor GreA (NCBI ptt file) | 0.49 | SO4468 | | transcriptional regulator, TetR family (NCBI ptt file) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_04085 | | Transcription elongation factor GreA | 0.42 | MPMX20_01987 | | HTH-type transcriptional repressor NemR | low | > 85 |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_3232 | | transcription elongation factor GreA | 0.42 | EX28DRAFT_1647 | | transcriptional regulator, TetR family | low | > 76 |
| Shewanella amazonensis SB2B | 0.59 | Sama_0951 | | GreA/GreB family elongation factor (RefSeq) | 0.48 | Sama_0476 | | TetR family transcriptional regulator (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.59 | HP15_3076 | | protein containing prokaryotic transcription elongation factor GreA domain | 0.22 | HP15_3141 | | transcriptional regulator, TetR family | low | > 73 |
| Klebsiella michiganensis M5al | 0.59 | BWI76_RS25160 | | transcription elongation factor GreA | 0.43 | BWI76_RS16470 | | transcriptional repressor NemR | low | > 92 |
| Pantoea sp. MT58 | 0.58 | IAI47_17080 | | transcription elongation factor GreA | 0.36 | IAI47_10760 | | TetR/AcrR family transcriptional regulator | low | > 76 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_01880 | | transcription elongation factor GreA | 0.42 | IAI46_11285 | | TetR/AcrR family transcriptional regulator | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.56 | MPMX26_00765 | | Transcription elongation factor GreA | 0.38 | MPMX26_00888 | | HTH-type transcriptional repressor NemR | low | > 36 |
| Rahnella sp. WP5 | 0.56 | EX31_RS08595 | | transcription elongation factor GreA | 0.49 | EX31_RS01435 | | TetR/AcrR family transcriptional regulator | low | > 89 |
| Dechlorosoma suillum PS | 0.49 | Dsui_3063 | | transcription elongation factor GreA | 0.58 | Dsui_1876 | | transcriptional regulator | low | > 51 |
| Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS06930 | | transcription elongation factor GreA | 0.46 | HSERO_RS18905 | | TetR family transcriptional regulator | — | — |
| Ralstonia sp. UNC404CL21Col | 0.48 | ABZR87_RS14135 | | transcription elongation factor GreA | 0.41 | ABZR87_RS10845 | | TetR/AcrR family transcriptional regulator | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS04785 | | transcription elongation factor GreA | 0.19 | QEN71_RS20880 | | TetR/AcrR family transcriptional regulator | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS15260 | | transcription elongation factor GreA | 0.40 | RPSI07_RS18170 | | TetR/AcrR family transcriptional regulator | low | > 81 |
| Phaeobacter inhibens DSM 17395 | 0.47 | PGA1_c03290 | | transcription elongation factor GreA | 0.42 | PGA1_c30430 | | transcriptional regulator, TetR family | low | > 62 |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS02185 | | transcription elongation factor GreA | 0.39 | RALBFv3_RS15205 | | TetR/AcrR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS15495 | | transcription elongation factor GreA | 0.39 | UW163_RS12675 | | TetR/AcrR family transcriptional regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_04404 | | GreA/GreB family elongation factor | 0.46 | H281DRAFT_01790 | | transcriptional regulator, TetR family | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS07635 | | transcription elongation factor GreA | 0.42 | RS_RS06015 | | TetR/AcrR family transcriptional regulator | — | — |
| Variovorax sp. SCN45 | 0.45 | GFF374 | | Transcription elongation factor GreA | 0.22 | GFF4224 | | Transcriptional regulator, AcrR family | low | > 127 |
| Magnetospirillum magneticum AMB-1 | 0.45 | AMB_RS03610 | | transcription elongation factor GreA | 0.12 | AMB_RS09490 | | TetR/AcrR family transcriptional regulator | low | > 64 |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS17070 | | transcription elongation factor GreA | 0.21 | ABID97_RS26745 | | TetR/AcrR family transcriptional regulator | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.42 | DvMF_0383 | greA | transcription elongation factor GreA (RefSeq) | 0.21 | DvMF_3038 | | transcriptional regulator, TetR family (RefSeq) | — | — |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A2887 | | GreA/GreB family elongation factor (NCBI) | 0.13 | Rru_A0888 | | Transcriptional Regulator, TetR family (NCBI) | low | > 58 |
| Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS05595 | | transcription elongation factor GreA | 0.46 | ABZR86_RS19675 | | TetR/AcrR family transcriptional regulator | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.35 | ABZR88_RS00130 | | transcription elongation factor GreA | 0.13 | ABZR88_RS11490 | | TetR/AcrR family transcriptional regulator | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.32 | Echvi_0180 | | transcription elongation factor GreA | 0.14 | Echvi_2619 | | Transcriptional regulator | low | > 79 |
Not shown: 46 genomes with orthologs for PP_4722 only; 0 genomes with orthologs for PP_2475 only