Conservation of cofitness between PP_2337 and PP_2333 in Pseudomonas putida KT2440

31 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas putida KT2440	1.0	PP_2337		aconitate isomerase	1.0	PP_2333		GntR family transcriptional regulator	0.41	4
Pseudomonas fluorescens GW456-L13	0.86	PfGW456L13_4115		2-methylaconitate cis-trans isomerase	0.85	PfGW456L13_4119		Propionate catabolism operon transcriptional regulator of GntR family [predicted]	low	> 87
Cupriavidus basilensis FW507-4G11	0.85	RR42_RS11275		3-methylitaconate isomerase	0.19	RR42_RS30405		GntR family transcriptional regulator	low	> 128
Pseudomonas simiae WCS417	0.84	PS417_21065		3-methylitaconate isomerase	0.84	PS417_21085		GntR family transcriptional regulator	low	> 88
Pseudomonas fluorescens FW300-N2E3	0.84	AO353_00885		3-methylitaconate isomerase	0.86	AO353_00905		GntR family transcriptional regulator	0.51	4
Pseudomonas fluorescens FW300-N1B4	0.84	Pf1N1B4_3822		2-methylaconitate cis-trans isomerase	0.85	Pf1N1B4_3818		Propionate catabolism operon transcriptional regulator of GntR family [predicted]	—	—
Pseudomonas fluorescens SBW25	0.84	PFLU_RS22675		2-methylaconitate cis-trans isomerase PrpF	0.84	PFLU_RS22695		GntR family transcriptional regulator	low	> 109
Pseudomonas fluorescens SBW25-INTG	0.84	PFLU_RS22675		2-methylaconitate cis-trans isomerase PrpF	0.84	PFLU_RS22695		GntR family transcriptional regulator	0.42	4
Pseudomonas fluorescens FW300-N2E2	0.83	Pf6N2E2_6064		2-methylaconitate isomerase	0.85	Pf6N2E2_6060		Propionate catabolism operon transcriptional regulator of GntR family [predicted]	0.41	7
Pseudomonas fluorescens FW300-N2C3	0.83	AO356_20880		3-methylitaconate isomerase	0.85	AO356_20860		GntR family transcriptional regulator	0.26	53
Ralstonia sp. UNC404CL21Col	0.83	ABZR87_RS16730		2-methylaconitate cis-trans isomerase PrpF	0.18	ABZR87_RS08175		GntR family transcriptional regulator	low	> 80
Pseudomonas sp. RS175	0.82	PFR28_02924		2-methyl-aconitate isomerase	0.85	PFR28_02929		HTH-type transcriptional repressor GlaR	0.65	4
Pseudomonas sp. S08-1	0.82	OH686_01675		probable AcnD-accessory protein PrpF	0.83	OH686_01695		Propionate catabolism operon transcriptional regulator of GntR family	—	—
Paraburkholderia sabiae LMG 24235	0.82	QEN71_RS31055		2-methylaconitate cis-trans isomerase PrpF	0.18	QEN71_RS17000		GntR family transcriptional regulator	low	> 153
Shewanella sp. ANA-3	0.81	Shewana3_3828		methylitaconate delta2-delta3-isomerase (RefSeq)	0.46	Shewana3_3824		GntR family transcriptional regulator (RefSeq)	0.71	4
Xanthomonas campestris pv. campestris strain 8004	0.81	Xcc-8004.3976.1		2-methylaconitate cis-trans isomerase	0.16	Xcc-8004.744.1		Predicted regulator PutR for proline utilization, GntR family	low	> 74
Burkholderia phytofirmans PsJN	0.81	BPHYT_RS30140		3-methylitaconate isomerase	0.18	BPHYT_RS07325		GntR family transcriptional regulator	low	> 109
Shewanella oneidensis MR-1	0.81	SO0342		conserved hypothetical protein (NCBI ptt file)	0.45	SO0346		transcriptional regulator. GntR family (NCBI ptt file)	low	> 76
Paraburkholderia graminis OAS925	0.81	ABIE53_005044		putative AcnD-accessory protein PrpF	0.18	ABIE53_005070		DNA-binding GntR family transcriptional regulator	low	> 113
Pseudomonas stutzeri RCH2	0.80	Psest_2318		probable AcnD-accessory protein PrpF	0.80	Psest_2322		Transcriptional regulators	—	—
Variovorax sp. SCN45	0.80	GFF269		2-methylaconitate isomerase	0.23	GFF1475		no description	low	> 127
Paraburkholderia bryophila 376MFSha3.1	0.80	H281DRAFT_02982		2-methylaconitate cis-trans isomerase	0.29	H281DRAFT_05550		DNA-binding transcriptional regulator, GntR family	low	> 103
Pseudomonas syringae pv. syringae B728a ΔmexB	0.80	Psyr_2088		2-methylaconitate cis-trans isomerase	0.85	Psyr_2084		transcriptional regulator, GntR family	low	> 86
Pseudomonas syringae pv. syringae B728a	0.80	Psyr_2088		2-methylaconitate cis-trans isomerase	0.85	Psyr_2084		transcriptional regulator, GntR family	low	> 86
Herbaspirillum seropedicae SmR1	0.78	HSERO_RS11420		3-methylitaconate isomerase	0.76	HSERO_RS11430		GntR family transcriptional regulator	—	—
Acidovorax sp. GW101-3H11	0.76	Ac3H11_2325		2-methylaconitate cis-trans isomerase	0.19	Ac3H11_960		Transcriptional regulator, GntR family	—	—
Marinobacter adhaerens HP15	0.76	HP15_1929		AcnD-accessory protein PrpF	0.48	HP15_1933		transcriptional regulator, GntR family	—	—
Azospirillum brasilense Sp245	0.75	AZOBR_RS24310		3-methylitaconate isomerase	0.20	AZOBR_RS22370		transcriptional regulator	low	> 97
Shewanella amazonensis SB2B	0.75	Sama_3297		hypothetical protein (RefSeq)	0.47	Sama_3293		GntR family transcriptional regulator (RefSeq)	low	> 62
Shewanella loihica PV-4	0.74	Shew_1823		putative AcnD-accessory protein PrpF (RefSeq)	0.44	Shew_0280		GntR family transcriptional regulator (RefSeq)	low	> 60
Alteromonas macleodii MIT1002	0.72	MIT1002_03132		3-methylitaconate isomerase	0.40	MIT1002_03128		Carbon starvation induced regulator	—	—
Vibrio cholerae E7946 ATCC 55056	0.72	CSW01_06750		2-methylaconitate cis-trans isomerase PrpF	0.46	CSW01_06730		GntR family transcriptional regulator	low	> 62

Not shown: 9 genomes with orthologs for PP_2337 only; 8 genomes with orthologs for PP_2333 only