Conservation of cofitness between PP_4402 and PP_2217 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4402 branched-chain alpha-keto acid dehydrogenase complex, beta subunit 1.0 PP_2217 enoyl-CoA hydratase 0.42 11
Pseudomonas sp. BP01 1.00 JOY50_RS00850 alpha-ketoacid dehydrogenase subunit beta 1.00 JOY50_RS12620 enoyl-CoA hydratase low > 84
Pseudomonas sp. SVBP6 0.95 COO64_RS21460 alpha-ketoacid dehydrogenase subunit beta 0.97 COO64_RS19325 enoyl-CoA hydratase low > 93
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_22985 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.86 AO356_26360 enoyl-CoA hydratase 0.45 19
Pseudomonas sp. DMC3 0.92 GFF1607 2-oxoisovalerate dehydrogenase subunit beta 0.84 GFF2722 putative enoyl-CoA hydratase echA8 low > 89
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) 0.86 Pf6N2E2_1147 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.57 14
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_26640 2-oxoisovalerate dehydrogenase 0.85 AO353_25675 enoyl-CoA hydratase
Pseudomonas sp. RS175 0.91 PFR28_02446 2-oxoisovalerate dehydrogenase subunit beta 0.85 PFR28_01884 putative enoyl-CoA hydratase echA8 0.82 5
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_4479 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.86 Pf1N1B4_4788 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Pseudomonas simiae WCS417 0.91 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.86 PS417_13845 enoyl-CoA hydratase
Pseudomonas fluorescens SBW25 0.90 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.85 PFLU_RS14775 enoyl-CoA hydratase low > 109
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_3541 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.86 PfGW456L13_2984 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.78 14
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.85 PFLU_RS14775 enoyl-CoA hydratase 0.42 21
Variovorax sp. OAS795 0.84 ABID97_RS06675 alpha-ketoacid dehydrogenase subunit beta 0.57 ABID97_RS26735 enoyl-CoA hydratase
Castellaniella sp019104865 MT123 0.83 ABCV34_RS04970 alpha-ketoacid dehydrogenase subunit beta 0.62 ABCV34_RS10435 enoyl-CoA hydratase
Agrobacterium fabrum C58 0.78 Atu3472 2-oxoisovalerate dehydrogenase subunit beta 0.63 Atu0322 enoyl CoA hydratase 0.16 51
Sinorhizobium meliloti 1021 0.76 SMc03202 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.66 SMc01153 enoyl-CoA hydratase 0.13 80
Bosea sp. OAE506 0.76 ABIE41_RS02480 alpha-ketoacid dehydrogenase subunit beta 0.78 ABIE41_RS04195 enoyl-CoA hydratase 0.37 3
Sphingomonas koreensis DSMZ 15582 0.74 Ga0059261_2272 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 0.66 Ga0059261_3685 Enoyl-CoA hydratase/carnithine racemase low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.69 A4249_RS13195 alpha-ketoacid dehydrogenase subunit beta 0.59 A4249_RS14515 enoyl-CoA hydratase-related protein low > 48
Shewanella loihica PV-4 0.46 Shew_1926 transketolase, central region (RefSeq) 0.27 Shew_2672 carnitinyl-CoA dehydratase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.46 Sama_1710 alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) 0.23 Sama_1378 enoyl-CoA hydratase (RefSeq) low > 62
Shewanella sp. ANA-3 0.46 Shewana3_2130 transketolase, central region (RefSeq) 0.23 Shewana3_2768 enoyl-CoA hydratase (RefSeq) 0.51 14
Shewanella oneidensis MR-1 0.45 SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) 0.23 SO1680 enoyl-CoA hydratase/isomerase family protein (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.42 ABIE51_RS04040 alpha-ketoacid dehydrogenase subunit beta 0.35 ABIE51_RS07570 enoyl-CoA hydratase-related protein
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS18445 alpha-ketoacid dehydrogenase subunit beta 0.36 ABZR86_RS00870 enoyl-CoA hydratase-related protein
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_00750 acoB alpha-ketoacid dehydrogenase subunit beta 0.33 OKGIIK_03935 Enoyl-CoA hydratase
Mycobacterium tuberculosis H37Rv 0.40 Rv2496c Probable branched-chain keto acid dehydrogenase E1 component, beta subunit BkdB 0.65 Rv1070c Probable enoyl-CoA hydratase EchA8 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) low > 58
Ralstonia solanacearum PSI07 0.40 RPSI07_RS16525 alpha-ketoacid dehydrogenase subunit beta 0.62 RPSI07_RS10800 enoyl-CoA hydratase low > 81
Rhodanobacter denitrificans MT42 0.40 LRK55_RS05635 alpha-ketoacid dehydrogenase subunit beta 0.35 LRK55_RS14880 enoyl-CoA hydratase-related protein
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS05880 alpha-ketoacid dehydrogenase subunit beta 0.35 LRK54_RS15165 enoyl-CoA hydratase-related protein
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS00945 alpha-ketoacid dehydrogenase subunit beta 0.62 RALBFv3_RS06440 enoyl-CoA hydratase low > 76
Ralstonia solanacearum UW163 0.40 UW163_RS14255 alpha-ketoacid dehydrogenase subunit beta 0.62 UW163_RS07185 enoyl-CoA hydratase
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.570.1 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.35 Xcc-8004.3347.1 Enoyl-CoA hydratase (EC 4.2.1.17)
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS17290 alpha-ketoacid dehydrogenase subunit beta 0.34 LRK53_RS13455 enoyl-CoA hydratase-related protein
Ralstonia solanacearum GMI1000 0.38 RS_RS09075 alpha-ketoacid dehydrogenase subunit beta 0.63 RS_RS14385 enoyl-CoA hydratase low > 80
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS33050 2-oxoisovalerate dehydrogenase 0.61 RR42_RS18250 enoyl-CoA hydratase low > 128

Not shown: 3 genomes with orthologs for PP_4402 only; 49 genomes with orthologs for PP_2217 only