Conservation of cofitness between PP_2903 and PP_2163 in Pseudomonas putida KT2440

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) 1.0 PP_2163 VacJ lipoprotein 0.29 13
Pseudomonas sp. RS175 0.81 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 0.76 PFR28_01139 Intermembrane phospholipid transport system lipoprotein MlaA low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.76 Pf6N2E2_2261 VacJ-like lipoprotein precursor — —
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_01015 peptidylprolyl isomerase 0.75 AO356_02190 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.78 Psyr_1910 VacJ-like lipoprotein low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.78 Psyr_1910 VacJ-like lipoprotein low > 86
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.77 Pf1N1B4_62 VacJ-like lipoprotein precursor — —
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.76 PfGW456L13_4012 VacJ-like lipoprotein precursor low > 87
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_27825 peptidylprolyl isomerase 0.74 AO353_00330 hypothetical protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.74 PFLU_RS07785 VacJ family lipoprotein low > 109
Pseudomonas fluorescens SBW25 0.76 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase 0.74 PFLU_RS07785 VacJ family lipoprotein low > 109
Pseudomonas simiae WCS417 0.75 PS417_16900 peptidylprolyl isomerase 0.74 PS417_07710 membrane protein — —
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS10630 peptidylprolyl isomerase 0.39 ABZR87_RS02540 VacJ family lipoprotein low > 80
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS14985 cyclophilin 0.38 RALBFv3_RS06885 ABC transporter low > 76
Ralstonia solanacearum UW163 0.72 UW163_RS12455 cyclophilin 0.38 UW163_RS06730 ABC transporter — —
Ralstonia solanacearum GMI1000 0.71 RS_RS05800 cyclophilin 0.38 RS_RS14830 ABC transporter — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS18390 cyclophilin 0.38 RPSI07_RS10350 ABC transporter — —
Pseudomonas stutzeri RCH2 0.70 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.65 Psest_2712 Surface lipoprotein low > 67
Rahnella sp. WP5 0.68 EX31_RS22640 peptidylprolyl isomerase B 0.25 EX31_RS19725 phospholipid-binding lipoprotein MlaA — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS00375 peptidylprolyl isomerase 0.38 ABCV34_RS11195 MlaA family lipoprotein low > 48
Pseudomonas sp. S08-1 0.68 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB 0.69 OH686_22720 Outer-membrane-phospholipid-binding lipoprotein MlaA low > 80
Dechlorosoma suillum PS 0.67 Dsui_3088 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.41 Dsui_1401 surface lipoprotein low > 51
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS06335 cyclophilin 0.40 RR42_RS18955 ABC transporter low > 128
Serratia liquefaciens MT49 0.65 IAI46_05385 peptidylprolyl isomerase B 0.23 IAI46_18065 phospholipid-binding lipoprotein MlaA low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF5146 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.41 GFF1322 Nucleoside ABC transporter, periplasmic nucleoside-binding protein low > 90
Pantoea sp. MT58 0.65 IAI47_14340 peptidylprolyl isomerase B 0.26 IAI47_06110 phospholipid-binding lipoprotein MlaA — —
Variovorax sp. SCN45 0.65 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.41 GFF5337 Outer-membrane-phospholipid-binding lipoprotein MlaA low > 127
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS09310 cyclophilin 0.35 HSERO_RS20385 ABC transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.24 GFF1958 Lipoprotein — —
Escherichia coli ECRC101 0.64 MCAODC_27045 ppiB peptidylprolyl isomerase B 0.24 MCAODC_13565 mlaA phospholipid-binding lipoprotein MlaA — —
Enterobacter sp. TBS_079 0.64 MPMX20_01101 Peptidyl-prolyl cis-trans isomerase B 0.25 MPMX20_03272 Intermembrane phospholipid transport system lipoprotein MlaA low > 85
Escherichia coli ECRC101 0.64 OKFHMN_07825 ppiB peptidylprolyl isomerase B 0.24 OKFHMN_22535 mlaA phospholipid-binding lipoprotein MlaA — —
Escherichia coli ECRC98 0.64 JDDGAC_11475 ppiB peptidylprolyl isomerase B 0.24 JDDGAC_26495 mlaA phospholipid-binding lipoprotein MlaA — —
Escherichia coli ECOR38 0.64 HEPCGN_06465 ppiB peptidylprolyl isomerase B 0.24 HEPCGN_21730 mlaA phospholipid-binding lipoprotein MlaA — —
Escherichia coli ECRC99 0.64 KEDOAH_20145 ppiB peptidylprolyl isomerase B 0.24 KEDOAH_05660 mlaA phospholipid-binding lipoprotein MlaA — —
Escherichia coli ECRC102 0.64 NIAGMN_05880 ppiB peptidylprolyl isomerase B 0.24 NIAGMN_20310 mlaA phospholipid-binding lipoprotein MlaA — —
Klebsiella michiganensis M5al 0.64 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase 0.23 BWI76_RS20475 phospholipid-binding lipoprotein MlaA — —
Escherichia coli ECRC62 0.64 BNILDI_22245 ppiB peptidylprolyl isomerase B 0.24 BNILDI_13080 mlaA phospholipid-binding lipoprotein MlaA — —
Escherichia fergusonii Becca 0.64 EFB2_03536 Peptidyl-prolyl cis-trans isomerase B 0.25 EFB2_01514 Intermembrane phospholipid transport system lipoprotein MlaA — —
Escherichia coli Nissle 1917 0.64 ECOLIN_RS03045 peptidylprolyl isomerase B 0.25 ECOLIN_RS13570 phospholipid-binding lipoprotein MlaA — —
Variovorax sp. OAS795 0.64 ABID97_RS17860 peptidylprolyl isomerase 0.38 ABID97_RS23200 VacJ family lipoprotein low > 91
Escherichia coli ECOR27 0.64 NOLOHH_00815 ppiB peptidylprolyl isomerase B 0.24 NOLOHH_14170 mlaA phospholipid-binding lipoprotein MlaA — —
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1021 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.39 B158DRAFT_1335 Surface lipoprotein low > 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_03156 Peptidyl-prolyl cis-trans isomerase B 0.24 OHPLBJKB_01360 putative phospholipid-binding lipoprotein MlaA — —
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2455 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.25 EX28DRAFT_0267 Surface lipoprotein — —
Escherichia coli BL21 0.64 ECD_00475 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.24 ECD_02272 ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component — —
Escherichia coli BW25113 0.64 b0525 ppiB peptidyl-prolyl cis-trans isomerase B (rotamase B) (NCBI) 0.25 b2346 vacJ predicted lipoprotein (NCBI) — —
Erwinia tracheiphila SCR3 0.63 LU632_RS15235 ppiB peptidylprolyl isomerase B 0.24 LU632_RS07300 mlaA phospholipid-binding lipoprotein MlaA — —
Pectobacterium carotovorum WPP14 0.62 HER17_RS06485 peptidylprolyl isomerase B 0.24 HER17_RS06855 phospholipid-binding lipoprotein MlaA — —
Dickeya dianthicola ME23 0.62 DZA65_RS15980 peptidylprolyl isomerase B 0.25 DZA65_RS15515 phospholipid-binding lipoprotein MlaA — —
Dickeya dadantii 3937 0.62 DDA3937_RS15095 peptidylprolyl isomerase B 0.26 DDA3937_RS14625 phospholipid-binding lipoprotein MlaA — —
Shewanella oneidensis MR-1 0.62 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) 0.27 SO3197 vacJ lipoprotein, putative (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.61 HGI48_RS15175 peptidylprolyl isomerase B 0.25 HGI48_RS14575 phospholipid-binding lipoprotein MlaA low > 71
Shewanella amazonensis SB2B 0.59 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) 0.28 Sama_2268 vacJ lipoprotein, putative (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_09260 peptidylprolyl isomerase 0.24 CSW01_10245 ABC transporter low > 62

Not shown: 16 genomes with orthologs for PP_2903 only; 6 genomes with orthologs for PP_2163 only