Conservation of cofitness between PP_4782 and PP_2001 in Pseudomonas putida KT2440

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4782 Phosphomethylpyrimidine kinase 1.0 PP_2001 O-succinylhomoserine sulfhydrylase 0.58 8
Pseudomonas fluorescens SBW25 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.87 PFLU_RS20510 O-succinylhomoserine sulfhydrylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS26530 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.87 PFLU_RS20510 O-succinylhomoserine sulfhydrylase 0.43 11
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15435 hydrogenase 0.86 AO356_21470 O-succinylhomoserine sulfhydrylase low > 104
Pseudomonas simiae WCS417 0.87 PS417_24600 hydrogenase 0.88 PS417_18530 O-succinylhomoserine sulfhydrylase low > 88
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_06350 hydrogenase 0.86 AO353_20695 O-succinylhomoserine sulfhydrylase low > 101
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1385 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.86 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.90 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.90 Psyr_1669 O-succinylhomoserine sulfhydrylase low > 86
Pseudomonas sp. RS175 0.84 PFR28_03843 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.87 PFR28_02810 O-succinylhomoserine sulfhydrylase 0.34 57
Pseudomonas sp. S08-1 0.82 OH686_09185 Hydroxymethylpyrimidine phosphate kinase ThiD 0.81 OH686_04415 O-succinylhomoserine sulfhydrylase 0.69 10
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.86 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 103
Pseudomonas stutzeri RCH2 0.78 Psest_0537 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.81 Psest_2578 O-succinylhomoserine sulfhydrylase low > 67
Dechlorosoma suillum PS 0.40 Dsui_0662 phosphomethylpyrimidine kinase 0.55 Dsui_3185 O-succinylhomoserine sulfhydrylase — —
Acinetobacter radioresistens SK82 0.38 MPMX26_02438 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.64 MPMX26_01645 O-succinylhomoserine sulfhydrylase — —
Rhizobium sp. OAE497 0.27 ABIE40_RS25930 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.42 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase 0.45 40
Marinobacter adhaerens HP15 0.27 HP15_349 phosphomethylpyrimidine kinase 0.61 HP15_1820 methionine gamma-lyase — —
Rhodospirillum rubrum S1H 0.27 Rru_A1102 Phosphomethylpyrimidine kinase (NCBI) 0.42 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI) — —
Agrobacterium fabrum C58 0.25 Atu3290 phosphomethylpyrimidine kinase 0.43 Atu0432 O-succinylhomoserine sulfhydrylase 0.75 23
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF249 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.52 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 90
Bosea sp. OAE506 0.24 ABIE41_RS21620 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.43 ABIE41_RS03970 O-succinylhomoserine sulfhydrylase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_0215 phosphomethylpyrimidine kinase 0.47 Echvi_2283 Cystathionine beta-lyases/cystathionine gamma-synthases low > 79
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_03331 phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase 0.43 CCNA_02321 O-succinylhomoserine sulfhydrylase — —
Caulobacter crescentus NA1000 0.23 CCNA_03331 phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase 0.43 CCNA_02321 O-succinylhomoserine sulfhydrylase — —
Azospirillum brasilense Sp245 0.23 AZOBR_RS07045 phosphomethylpyrimidine kinase 0.42 AZOBR_RS02140 O-succinylhomoserine sulfhydrylase — —
Rhodopseudomonas palustris CGA009 0.22 TX73_020570 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.43 TX73_024775 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia graminis OAS925 0.22 ABIE53_001125 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.53 ABIE53_004817 O-succinylhomoserine sulfhydrylase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_04811 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.52 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase low > 103
Magnetospirillum magneticum AMB-1 0.22 AMB_RS16155 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.46 AMB_RS21365 O-succinylhomoserine sulfhydrylase — —
Azospirillum sp. SherDot2 0.21 MPMX19_06182 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.41 MPMX19_01364 O-succinylhomoserine sulfhydrylase — —
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_1961 hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.41 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_20430 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 0.45 CA264_02530 O-succinylhomoserine sulfhydrylase low > 74
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS06305 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.52 QEN71_RS17685 O-succinylhomoserine sulfhydrylase — —
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS24160 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.47 CA265_RS13080 O-succinylhomoserine sulfhydrylase low > 88
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS04205 kinase 0.52 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase low > 109
Variovorax sp. OAS795 0.19 ABID97_RS15330 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.54 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS01370 phosphomethylpyrimidine kinase 0.53 RR42_RS14320 O-succinylhomoserine sulfhydrylase — —
Sinorhizobium meliloti 1021 0.19 SM_b20962 phoshomethylpyrimidine kinase 0.42 SMc02217 O-succinylhomoserine sulfhydrylase low > 103
Dinoroseobacter shibae DFL-12 0.18 Dshi_0915 phosphomethylpyrimidine kinase (RefSeq) 0.46 Dshi_2410 O-succinylhomoserine sulfhydrylase (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.18 Rv0422c Probable phosphomethylpyrimidine kinase ThiD (HMP-phosphate kinase) (HMP-P kinase) 0.42 Rv0391 Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase) — —
Phaeobacter inhibens DSM 17395 0.17 PGA1_c09030 phosphomethylpyrimidine kinase ThiD 0.42 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ low > 62
Variovorax sp. SCN45 0.16 GFF2149 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.53 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —

Not shown: 52 genomes with orthologs for PP_4782 only; 0 genomes with orthologs for PP_2001 only