Conservation of cofitness between PP_5146 and PP_0937 in Pseudomonas putida KT2440

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5146 RNA pyrophosphohydrolase 1.0 PP_0937 endoribonuclease G (RNAse G) 0.43 9
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.91 PFLU_RS04325 ribonuclease G 0.52 9
Pseudomonas fluorescens SBW25 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.91 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas simiae WCS417 0.99 PS417_26990 RNA pyrophosphohydrolase 0.92 PS417_04270 ribonuclease G low > 88
Pseudomonas sp. RS175 0.98 PFR28_04831 RNA pyrophosphohydrolase 0.91 PFR28_00158 Ribonuclease G low > 88
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_952 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.91 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_3941 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.91 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 103
Pseudomonas syringae pv. syringae B728a 0.98 Psyr_4843 NUDIX hydrolase 0.90 Psyr_4159 RNAse G low > 86
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2283 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.91 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_08470 RNA pyrophosphohydrolase 0.91 AO353_05230 ribonuclease G low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.98 Psyr_4843 NUDIX hydrolase 0.90 Psyr_4159 RNAse G low > 86
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_10345 RNA pyrophosphohydrolase 0.91 AO356_07110 ribonuclease G low > 104
Pseudomonas sp. S08-1 0.92 OH686_11425 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 0.89 OH686_08595 Ribonuclease G low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_3863 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.89 Psest_3323 ribonuclease, Rne/Rng family — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00342 RNA pyrophosphohydrolase 0.57 MPMX26_00646 Ribonuclease G 0.68 18
Escherichia coli BL21 0.70 ECD_02678 RNA pyrophosphohydrolase 0.57 ECD_03106 ribonuclease G — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2905 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.57 EX28DRAFT_3297 ribonuclease, Rne/Rng family — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS15880 RNA pyrophosphohydrolase 0.57 ECOLIN_RS18605 ribonuclease G — —
Escherichia coli BW25113 0.70 b2830 nudH dinucleoside polyphosphate hydrolase (NCBI) 0.57 b3247 cafA bundles of cytoplasmic filaments (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00900 RNA pyrophosphohydrolase 0.57 OHPLBJKB_00458 Ribonuclease G — —
Escherichia fergusonii Becca 0.70 EFB2_01054 RNA pyrophosphohydrolase 0.57 EFB2_00584 Ribonuclease G — —
Dickeya dianthicola ME23 0.70 DZA65_RS05295 RNA pyrophosphohydrolase 0.57 DZA65_RS01430 ribonuclease G 0.39 17
Escherichia coli ECRC101 0.69 MCAODC_10525 rppH RNA pyrophosphohydrolase 0.57 MCAODC_08265 rng ribonuclease G — —
Escherichia coli ECRC62 0.69 BNILDI_10365 rppH RNA pyrophosphohydrolase 0.57 BNILDI_01990 rng ribonuclease G — —
Escherichia coli ECRC99 0.69 KEDOAH_08130 rppH RNA pyrophosphohydrolase 0.57 KEDOAH_10405 rng ribonuclease G — —
Escherichia coli ECOR38 0.69 HEPCGN_19255 rppH RNA pyrophosphohydrolase 0.57 HEPCGN_16610 rng ribonuclease G — —
Dickeya dianthicola 67-19 0.69 HGI48_RS04955 RNA pyrophosphohydrolase 0.57 HGI48_RS01370 ribonuclease G — —
Escherichia coli ECRC102 0.69 NIAGMN_17770 rppH RNA pyrophosphohydrolase 0.57 NIAGMN_15505 rng ribonuclease G — —
Escherichia coli ECRC98 0.69 JDDGAC_23665 rppH RNA pyrophosphohydrolase 0.57 JDDGAC_21370 rng ribonuclease G — —
Escherichia coli ECOR27 0.69 NOLOHH_11885 rppH RNA pyrophosphohydrolase 0.57 NOLOHH_09530 rng ribonuclease G — —
Escherichia coli ECRC101 0.69 OKFHMN_20000 rppH RNA pyrophosphohydrolase 0.57 OKFHMN_17745 rng ribonuclease G — —
Dickeya dadantii 3937 0.69 DDA3937_RS04945 RNA pyrophosphohydrolase 0.57 DDA3937_RS01450 ribonuclease G 0.65 33
Erwinia tracheiphila SCR3 0.69 LU632_RS06105 rppH RNA pyrophosphohydrolase 0.56 LU632_RS21430 rng ribonuclease G — —
Pantoea sp. MT58 0.69 IAI47_03915 RNA pyrophosphohydrolase 0.57 IAI47_02455 ribonuclease G low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1312 'Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)' transl_table=11 0.57 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.82 21
Klebsiella michiganensis M5al 0.69 BWI76_RS23275 RNA pyrophosphohydrolase 0.58 BWI76_RS25480 ribonuclease E/G — —
Pectobacterium carotovorum WPP14 0.69 HER17_RS16585 RNA pyrophosphohydrolase 0.57 HER17_RS20150 ribonuclease G — —
Serratia liquefaciens MT49 0.69 IAI46_20455 RNA pyrophosphohydrolase 0.56 IAI46_22700 ribonuclease G low > 86
Rahnella sp. WP5 0.68 EX31_RS13205 RNA pyrophosphohydrolase 0.57 EX31_RS12255 ribonuclease G — —
Shewanella amazonensis SB2B 0.67 Sama_0863 dinucleoside polyphosphate hydrolase (RefSeq) 0.56 Sama_0471 ribonuclease G (RefSeq) — —
Shewanella loihica PV-4 0.67 Shew_1038 dinucleoside polyphosphate hydrolase (RefSeq) 0.56 Shew_0407 ribonuclease G (RefSeq) — —
Alteromonas macleodii MIT1002 0.66 MIT1002_00647 RNA pyrophosphohydrolase 0.59 MIT1002_00224 Ribonuclease G low > 70
Shewanella oneidensis MR-1 0.66 SO1331 MutT/nudix family protein (NCBI ptt file) 0.56 SO4094 cafA ribonuclease G (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_3043 dinucleoside polyphosphate hydrolase (RefSeq) 0.57 Shewana3_3644 ribonuclease G (RefSeq) — —
Rhodanobacter denitrificans MT42 0.65 LRK55_RS08860 RNA pyrophosphohydrolase 0.58 LRK55_RS03155 ribonuclease G 0.70 7
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS13805 RNA pyrophosphohydrolase 0.59 ABZR86_RS21730 ribonuclease G low > 74
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS09330 RNA pyrophosphohydrolase 0.58 LRK54_RS03405 ribonuclease G low > 59
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_15860 RNA pyrophosphohydrolase 0.61 OKGIIK_10290 rng ribonuclease G low > 52
Enterobacter sp. TBS_079 0.60 MPMX20_03693 RNA pyrophosphohydrolase 0.57 MPMX20_04153 Ribonuclease G — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS09820 RNA pyrophosphohydrolase 0.55 ABCV34_RS02480 ribonuclease G low > 48
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS01825 RNA pyrophosphohydrolase 0.58 HSERO_RS17790 ribonuclease — —
Dechlorosoma suillum PS 0.51 Dsui_1325 ADP-ribose pyrophosphatase 0.58 Dsui_0434 ribonuclease, Rne/Rng family low > 51

Not shown: 15 genomes with orthologs for PP_5146 only; 21 genomes with orthologs for PP_0937 only