Conservation of cofitness between PP_0937 and PP_0540 in Pseudomonas putida KT2440

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0937 endoribonuclease G (RNAse G) 1.0 PP_0540 conserved inner membrane protein 0.53 7
Pseudomonas simiae WCS417 0.92 PS417_04270 ribonuclease G 0.79 PS417_24835 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_05230 ribonuclease G 0.78 AO353_06585 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_07110 ribonuclease G 0.76 AO356_15200 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.77 Pf6N2E2_4974 DedA protein low > 103
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.77 PfGW456L13_1337 DedA protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS04325 ribonuclease G 0.79 PFLU_RS26770 DedA family protein 0.41 40
Pseudomonas fluorescens SBW25 0.91 PFLU_RS04325 ribonuclease G 0.79 PFLU_RS26770 DedA family protein low > 109
Pseudomonas sp. RS175 0.91 PFR28_00158 Ribonuclease G 0.77 PFR28_03891 Protein DedA low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.63 Pf1N1B4_2668 DedA protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4159 RNAse G 0.72 Psyr_0626 DedA low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4159 RNAse G 0.72 Psyr_0626 DedA low > 86
Pseudomonas sp. S08-1 0.89 OH686_08595 Ribonuclease G 0.55 OH686_14535 DedA protein low > 80
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS24430 ribonuclease G 0.47 QEN71_RS26430 DedA family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04515 RNAse G 0.50 H281DRAFT_04713 membrane-associated protein 0.33 66
Paraburkholderia graminis OAS925 0.59 ABIE53_001538 ribonuclease G 0.49 ABIE53_000878 membrane-associated protein low > 113
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS06375 ribonuclease 0.48 BPHYT_RS03655 membrane protein low > 109
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS17790 ribonuclease 0.52 HSERO_RS17220 membrane protein — —
Dechlorosoma suillum PS 0.58 Dsui_0434 ribonuclease, Rne/Rng family 0.49 Dsui_1547 putative membrane-associated protein — —
Klebsiella michiganensis M5al 0.58 BWI76_RS25480 ribonuclease E/G 0.57 BWI76_RS20375 membrane protein low > 92
Dickeya dadantii 3937 0.57 DDA3937_RS01450 ribonuclease G 0.57 DDA3937_RS14460 DedA family protein low > 74
Acinetobacter radioresistens SK82 0.57 MPMX26_00646 Ribonuclease G 0.52 MPMX26_00073 Protein DedA low > 36
Dickeya dianthicola ME23 0.57 DZA65_RS01430 ribonuclease G 0.55 DZA65_RS15365 DedA family protein low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS01370 ribonuclease G 0.56 HGI48_RS14430 DedA family protein low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.58 GFF1933 DedA protein low > 78
Rahnella sp. WP5 0.57 EX31_RS12255 ribonuclease G 0.57 EX31_RS19595 DedA family protein low > 89
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3297 ribonuclease, Rne/Rng family 0.58 EX28DRAFT_0287 Uncharacterized membrane-associated protein low > 76
Enterobacter sp. TBS_079 0.57 MPMX20_04153 Ribonuclease G 0.58 MPMX20_03252 Protein DedA low > 85
Pantoea sp. MT58 0.57 IAI47_02455 ribonuclease G 0.55 IAI47_06250 DedA family protein low > 76
Escherichia coli ECRC62 0.57 BNILDI_01990 rng ribonuclease G 0.57 BNILDI_13230 DedA family inner membrane protein — —
Escherichia coli ECRC99 0.57 KEDOAH_10405 rng ribonuclease G 0.57 KEDOAH_05520 Protein DedA — —
Escherichia coli ECOR27 0.57 NOLOHH_09530 rng ribonuclease G 0.57 NOLOHH_14310 Protein DedA low > 57
Escherichia coli BW25113 0.57 b3247 cafA bundles of cytoplasmic filaments (VIMSS) 0.57 b2317 dedA conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECOR38 0.57 HEPCGN_16610 rng ribonuclease G 0.57 HEPCGN_21880 DedA family inner membrane protein low > 85
Escherichia coli ECRC98 0.57 JDDGAC_21370 rng ribonuclease G 0.57 JDDGAC_26635 Protein DedA — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18605 ribonuclease G 0.58 ECOLIN_RS13430 DedA family protein low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00458 Ribonuclease G 0.57 OHPLBJKB_01388 Protein DedA low > 73
Escherichia coli BL21 0.57 ECD_03106 ribonuclease G 0.57 ECD_02242 DedA family inner membrane protein low > 60
Escherichia coli ECRC101 0.57 MCAODC_08265 rng ribonuclease G 0.57 MCAODC_13715 Protein DedA — —
Escherichia coli ECRC102 0.57 NIAGMN_15505 rng ribonuclease G 0.57 NIAGMN_20450 Protein DedA — —
Escherichia coli ECRC101 0.57 OKFHMN_17745 rng ribonuclease G 0.57 OKFHMN_22675 Protein DedA — —
Escherichia fergusonii Becca 0.57 EFB2_00584 Ribonuclease G 0.58 EFB2_01541 Protein DedA low > 86
Serratia liquefaciens MT49 0.56 IAI46_22700 ribonuclease G 0.56 IAI46_17835 DedA family protein low > 86
Erwinia tracheiphila SCR3 0.56 LU632_RS21430 rng ribonuclease G 0.58 LU632_RS07830 DedA family protein low > 74
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS04700 ribonuclease G 0.52 RR42_RS17200 membrane protein — —
Castellaniella sp019104865 MT123 0.55 ABCV34_RS02480 ribonuclease G 0.49 ABCV34_RS08780 VTT domain-containing protein low > 48
Ralstonia solanacearum PSI07 0.55 RPSI07_RS13650 ribonuclease G 0.48 RPSI07_RS12090 membrane protein — —
Ralstonia solanacearum GMI1000 0.55 RS_RS11025 ribonuclease G 0.47 RS_RS12830 membrane protein — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS15440 ribonuclease G 0.47 ABZR87_RS00865 VTT domain-containing protein low > 80
Ralstonia solanacearum UW163 0.55 UW163_RS10095 ribonuclease G 0.48 UW163_RS08415 membrane protein — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS03575 ribonuclease G 0.48 RALBFv3_RS05210 membrane protein — —
Acidovorax sp. GW101-3H11 0.54 Ac3H11_2416 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.52 Ac3H11_312 DedA protein — —
Variovorax sp. SCN45 0.53 GFF295 Ribonuclease G 0.52 GFF4801 DedA protein low > 127
Variovorax sp. OAS795 0.53 ABID97_RS16705 ribonuclease G 0.52 ABID97_RS20305 DedA family protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF4531 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 0.49 GFF5484 DedA protein — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS20445 Rne/Rng family ribonuclease 0.42 ABZR88_RS01745 DedA family protein — —

Not shown: 17 genomes with orthologs for PP_0937 only; 8 genomes with orthologs for PP_0540 only