Conservation of cofitness between PP_1317 and PP_0395 in Pseudomonas putida KT2440

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 1.0 PP_0395 putative type IV piliation protein 0.49 8
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_15245 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.89 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) — —
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_962 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.89 Pf1N1B4_2521 FIG004684: SpoVR-like protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_17065 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.92 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_5337 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.90 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Pseudomonas sp. S08-1 0.86 OH686_08390 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.87 OH686_15010 SpoVR-like protein — —
Pseudomonas sp. RS175 0.86 PFR28_03606 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.92 PFR28_04070 hypothetical protein — —
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.88 PFLU_RS27495 SpoVR family protein 0.41 25
Pseudomonas fluorescens SBW25 0.85 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.88 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas simiae WCS417 0.85 PS417_04155 ubiquinol-cytochrome C reductase 0.88 PS417_25840 SpoVR family protein — —
Pseudomonas stutzeri RCH2 0.84 Psest_3279 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.86 Psest_3674 Uncharacterized conserved protein — —
Marinobacter adhaerens HP15 0.65 HP15_545 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.74 HP15_2935 SpoVR family protein — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_03045 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.68 CSW01_09390 SpoVR family protein low > 62
Shewanella amazonensis SB2B 0.53 Sama_3021 ubiquinol--cytochrome-c reductase (RefSeq) 0.69 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 62
Shewanella loihica PV-4 0.53 Shew_0570 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.67 Shew_1831 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.51 SO0608 petA ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) 0.67 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) — —
Shewanella sp. ANA-3 0.50 Shewana3_0601 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.67 Shewana3_1636 SpoVR family protein (RefSeq) — —
Variovorax sp. SCN45 0.50 GFF6694 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.67 GFF2935 FIG004684: SpoVR-like protein low > 127
Castellaniella sp019104865 MT123 0.48 ABCV34_RS12635 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.12 ABCV34_RS05550 SpoVR family protein — —
Alteromonas macleodii MIT1002 0.47 MIT1002_00814 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.67 MIT1002_01231 SpoVR family protein low > 70
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS18825 ubiquinol-cytochrome C reductase 0.67 RR42_RS36475 SpoVR family protein low > 128
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS20245 ubiquinol-cytochrome C reductase 0.66 HSERO_RS21700 SpoVR family protein — —
Paraburkholderia graminis OAS925 0.44 ABIE53_003685 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.66 ABIE53_002316 stage V sporulation protein R 0.50 10
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05669 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.66 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS27785 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.65 QEN71_RS07385 SpoVR family protein low > 153
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS17630 ubiquinol-cytochrome C reductase 0.66 BPHYT_RS11180 SpoVR family protein low > 109
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS02385 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.64 ABZR87_RS14210 SpoVR family protein low > 80
Azospirillum sp. SherDot2 0.35 MPMX19_05012 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.48 MPMX19_02155 hypothetical protein — —
Magnetospirillum magneticum AMB-1 0.33 AMB_RS20675 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.49 AMB_RS10895 SpoVR family protein — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS20745 ubiquinol-cytochrome C reductase 0.50 AZOBR_RS12645 SpoVR family protein — —
Sinorhizobium meliloti 1021 0.30 SMc00187 ubiquinol-cytochrome C reductase iron-sulfur subunit protein 0.51 SMc01265 SpoVR family protein low > 103
Rhizobium sp. OAE497 0.30 ABIE40_RS13130 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.47 ABIE40_RS12540 SpoVR family protein low > 107
Phaeobacter inhibens DSM 17395 0.23 PGA1_c34000 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.48 PGA1_c02490 sporulation protein R-like protein — —

Not shown: 23 genomes with orthologs for PP_1317 only; 30 genomes with orthologs for PP_0395 only