Conservation of cofitness between PFLU_RS02430 and PFLU_RS28465 in Pseudomonas fluorescens SBW25

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.0 PFLU_RS28465 insulinase family protein 0.81 20
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 1.00 PFLU_RS28465 insulinase family protein low > 109
Pseudomonas simiae WCS417 0.98 PS417_02355 thiamine biosynthesis protein ThiC 0.96 PS417_26820 peptidase M16 low > 88
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_13010 thiamine biosynthesis protein ThiC 0.79 AO353_08260 peptidase M16 low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.70 Psyr_4753 Insulinase-like:Peptidase M16, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0544 hydroxymethylpyrimidine synthase 0.70 Psyr_4753 Insulinase-like:Peptidase M16, C-terminal low > 86
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.80 Pf6N2E2_4580 FIG015287: Zinc protease low > 103
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_08810 thiamine biosynthesis protein ThiC 0.80 AO356_13325 peptidase M16 low > 104
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.79 Pf1N1B4_2321 FIG015287: Zinc protease — —
Pseudomonas sp. RS175 0.94 PFR28_05091 Phosphomethylpyrimidine synthase 0.79 PFR28_04261 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.81 PfGW456L13_991 FIG015287: Zinc protease low > 87
Pseudomonas putida KT2440 0.91 PP_4922 Phosphomethylpyrimidine synthase 0.71 PP_5113 predicted Zn-dependent peptidases low > 96
Pseudomonas sp. S08-1 0.89 OH686_15885 phosphomethylpyrimidine synthase 0.73 OH686_14225 Zinc protease low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_0477 thiamine biosynthesis protein ThiC 0.67 Psest_0256 Predicted Zn-dependent peptidases — —
Herbaspirillum seropedicae SmR1 0.76 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.30 HSERO_RS20700 zinc protease low > 78
Dechlorosoma suillum PS 0.75 Dsui_0422 thiamine biosynthesis protein ThiC 0.30 Dsui_1026 putative Zn-dependent peptidase — —
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.15 OKGIIK_14300 Multidrug transporter low > 52
Pontibacter actiniarum KMM 6156, DSM 19842 0.74 CA264_20435 phosphomethylpyrimidine synthase ThiC 0.14 CA264_04195 peptidase M16 low > 74
Acinetobacter radioresistens SK82 0.74 MPMX26_00180 Phosphomethylpyrimidine synthase 0.29 MPMX26_01631 hypothetical protein — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.26 ABZR87_RS06955 pitrilysin family protein 0.57 40
Ralstonia solanacearum PSI07 0.72 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.26 RPSI07_RS22235 insulinase family protein low > 81
Shewanella loihica PV-4 0.71 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.17 Shew_3580 peptidase M16 domain-containing protein (RefSeq) low > 60
Ralstonia solanacearum UW163 0.71 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.25 UW163_RS02515 insulinase family protein — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.25 RALBFv3_RS11065 insulinase family protein low > 76
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS01290 thiamine biosynthesis protein ThiC 0.26 RR42_RS01985 zinc protease low > 128
Ralstonia solanacearum GMI1000 0.71 RS_RS00555 phosphomethylpyrimidine synthase 0.25 RS_RS01915 insulinase family protein low > 80
Shewanella amazonensis SB2B 0.71 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.16 Sama_3443 peptidase M16-like protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.69 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.16 Shewana3_3939 DNA-directed RNA polymerase (RefSeq) low > 73
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.26 GFF2317 FIG015287: Zinc protease low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.21 GFF816 FIG015287: Zinc protease low > 90
Acidovorax sp. GW101-3H11 0.66 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.26 Ac3H11_3874 FIG015287: Zinc protease low > 79
Variovorax sp. OAS795 0.66 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.27 ABID97_RS23880 pitrilysin family protein low > 91
Magnetospirillum magneticum AMB-1 0.66 AMB_RS01125 phosphomethylpyrimidine synthase 0.19 AMB_RS04275 insulinase family protein — —
Azospirillum brasilense Sp245 0.65 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.18 AZOBR_RS05055 zinc protease low > 97
Phaeobacter inhibens DSM 17395 0.64 PGA1_c09110 thiamine biosynthesis protein ThiC 0.20 PGA1_c32810 peptidase, M16 family low > 62
Rhodopseudomonas palustris CGA009 0.64 TX73_018540 phosphomethylpyrimidine synthase ThiC 0.18 TX73_022670 pitrilysin family protein low > 86
Dinoroseobacter shibae DFL-12 0.63 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) 0.16 Dshi_0362 peptidase M16 domain protein (RefSeq) — —
Bosea sp. OAE506 0.63 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.18 ABIE41_RS23240 pitrilysin family protein low > 77
Azospirillum sp. SherDot2 0.63 MPMX19_00336 Phosphomethylpyrimidine synthase 0.18 MPMX19_00521 hypothetical protein low > 112
Rhodospirillum rubrum S1H 0.60 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.17 Rru_A2973 Peptidase M16-like (NCBI) low > 58

Not shown: 54 genomes with orthologs for PFLU_RS02430 only; 3 genomes with orthologs for PFLU_RS28465 only