Conservation of cofitness between PFLU_RS02680 and PFLU_RS27025 in Pseudomonas fluorescens SBW25

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS02680 circularly permuted type 2 ATP-grasp protein 1.0 PFLU_RS27025 excinuclease ABC subunit UvrA 0.62 16
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS02680 circularly permuted type 2 ATP-grasp protein 1.00 PFLU_RS27025 excinuclease ABC subunit UvrA low > 109
Pseudomonas simiae WCS417 0.99 PS417_02610 hypothetical protein 1.00 PS417_25395 excinuclease ABC subunit A low > 88
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_1392 Protein containing domains DUF404, DUF407, DUF403 0.98 Pf1N1B4_2611 Excinuclease ABC subunit A low > 87
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_135 Protein containing domains DUF404, DUF407, DUF403 0.98 PfGW456L13_1283 Excinuclease ABC subunit A low > 87
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_13285 molybdopterin oxidoreductase 0.98 AO353_06855 ABC-ATPase UvrA low > 101
Pseudomonas sp. RS175 0.88 PFR28_05141 hypothetical protein 0.97 PFR28_03974 UvrABC system protein A low > 88
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_08555 molybdopterin oxidoreductase 0.97 AO356_14785 ABC-ATPase UvrA low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3593 Protein containing domains DUF404, DUF407, DUF403 0.97 Pf6N2E2_4888 Excinuclease ABC subunit A low > 103
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_0589 protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407 0.95 Psyr_4520 Excinuclease ABC subunit A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_0589 protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407 0.95 Psyr_4520 Excinuclease ABC subunit A low > 86
Pseudomonas sp. S08-1 0.72 OH686_15965 Protein containing domains DUF404, DUF407, DUF403 0.91 OH686_15495 excinuclease ABC subunit A low > 80
Dechlorosoma suillum PS 0.54 Dsui_3230 hypothetical protein 0.74 Dsui_1622 excinuclease ABC, A subunit low > 51
Marinobacter adhaerens HP15 0.45 HP15_3591 protein containing DUF404, bacteria N-terminal / DUF403, bacteria / DUF407 0.77 HP15_406 excinuclease ABC, ATPase subunit (A) low > 73
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS03205 hypothetical protein 0.70 HSERO_RS19810 excinuclease ABC subunit A low > 78
Azospirillum brasilense Sp245 0.38 AZOBR_RS22140 hypothetical protein 0.60 AZOBR_RS15370 excinuclease ABC subunit A low > 97
Azospirillum sp. SherDot2 0.38 MPMX19_01188 hypothetical protein 0.61 MPMX19_01152 UvrABC system protein A low > 112
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS21895 hypothetical protein 0.69 BPHYT_RS02970 excinuclease ABC subunit A low > 109
Acidovorax sp. GW101-3H11 0.34 Ac3H11_3843 Protein containing domains DUF404, DUF407, DUF403 0.66 Ac3H11_4387 Excinuclease ABC subunit A low > 79
Variovorax sp. OAS795 0.34 ABID97_RS20000 circularly permuted type 2 ATP-grasp protein 0.66 ABID97_RS04340 excinuclease ABC subunit UvrA low > 91
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_03091 Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily 0.68 H281DRAFT_01913 Excinuclease ABC subunit A low > 103
Variovorax sp. SCN45 0.33 GFF2687 Protein containing domains DUF404, DUF407, DUF403 0.66 GFF4944 Excinuclease ABC subunit A low > 127
Bosea sp. OAE506 0.33 ABIE41_RS23550 circularly permuted type 2 ATP-grasp protein 0.59 ABIE41_RS15100 excinuclease ABC subunit UvrA low > 77
Magnetospirillum magneticum AMB-1 0.33 AMB_RS04190 hypothetical protein 0.60 AMB_RS12410 excinuclease ABC subunit UvrA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF5554 Protein containing domains DUF404, DUF407, DUF403 0.66 GFF2755 Excinuclease ABC subunit A low > 90
Rhodospirillum rubrum S1H 0.33 Rru_A2559 hypothetical protein (NCBI) 0.62 Rru_A1752 Excinuclease ABC, A subunit (NCBI) low > 58
Ralstonia solanacearum PSI07 0.32 RPSI07_RS04735 hypothetical protein 0.70 RPSI07_RS22065 excinuclease ABC subunit UvrA low > 81
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS21310 circularly permuted type 2 ATP-grasp protein 0.70 ABZR87_RS07120 excinuclease ABC subunit UvrA low > 80
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS00540 hypothetical protein 0.69 RR42_RS02145 excinuclease ABC subunit A low > 128
Ralstonia solanacearum UW163 0.31 UW163_RS20285 hypothetical protein 0.70 UW163_RS02345 excinuclease ABC subunit UvrA — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS18845 hypothetical protein 0.70 RALBFv3_RS11235 excinuclease ABC subunit UvrA low > 76
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS18285 circularly permuted type 2 ATP-grasp protein 0.69 QEN71_RS01825 excinuclease ABC subunit UvrA low > 153
Rhizobium sp. OAE497 0.30 ABIE40_RS16460 circularly permuted type 2 ATP-grasp protein 0.59 ABIE40_RS09360 excinuclease ABC subunit UvrA low > 107
Rhodopseudomonas palustris CGA009 0.30 TX73_019435 circularly permuted type 2 ATP-grasp protein 0.61 TX73_014580 excinuclease ABC subunit UvrA low > 86
Sinorhizobium meliloti 1021 0.29 SMc04057 hypothetical protein 0.59 SMc01235 excinuclease ABC subunit A 0.48 2
Agrobacterium fabrum C58 0.28 Atu3866 hypothetical protein 0.60 Atu1513 ABC excinuclease subunit A low > 89
Dinoroseobacter shibae DFL-12 0.27 Dshi_0856 protein of unknown function DUF404 (RefSeq) 0.61 Dshi_1809 excinuclease ABC, A subunit (RefSeq) low > 64
Mycobacterium tuberculosis H37Rv 0.26 Rv2567 Conserved hypothetical alanine and leucine rich protein 0.55 Rv1638 Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA low > 58
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_2464 Uncharacterized conserved protein 0.60 Ga0059261_0674 excinuclease ABC, A subunit low > 68

Not shown: 0 genomes with orthologs for PFLU_RS02680 only; 64 genomes with orthologs for PFLU_RS27025 only