Conservation of cofitness between PFLU_RS05955 and PFLU_RS18565 in Pseudomonas fluorescens SBW25

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS05955 potassium transporter Kup 1.0 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.52 16
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS05955 potassium transporter Kup 1.00 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.99 PS417_05885 potassium transporter Kup 0.99 PS417_16525 isocitrate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_3162 Kup system potassium uptake protein 0.98 Pf1N1B4_4052 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 87
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_16880 potassium transporter Kup 0.98 AO353_27690 isocitrate dehydrogenase low > 101
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4652 Kup system potassium uptake protein 0.98 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 87
Pseudomonas sp. RS175 0.83 PFR28_00487 Low affinity potassium transport system protein kup 0.98 PFR28_02616 Isocitrate dehydrogenase [NADP] low > 88
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_05595 potassium transporter Kup 0.98 AO356_22135 isocitrate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_2977 Kup system potassium uptake protein 0.98 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 103
Pseudomonas putida KT2440 0.76 PP_1200 Probable potassium transport system protein kup 0.93 PP_4011 isocitrate dehydrogenase, NADP(+)-specific low > 96
Pseudomonas sp. S08-1 0.75 OH686_18885 Kup system potassium uptake protein 0.93 OH686_00220 isocitrate dehydrogenase, NADP-dependent — —
Dechlorosoma suillum PS 0.54 Dsui_3457 K+ transporter 0.70 Dsui_3296 isocitrate dehydrogenase, NADP-dependent, prokaryotic type low > 51
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS07555 potassium transporter Kup 0.78 RR42_RS17135 isocitrate dehydrogenase low > 128
Pectobacterium carotovorum WPP14 0.51 HER17_RS21570 low affinity potassium transporter Kup 0.76 HER17_RS11610 NADP-dependent isocitrate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_709 Kup system potassium uptake protein 0.76 Ac3H11_2377 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.38 33
Escherichia coli ECRC62 0.50 BNILDI_04635 kup low affinity potassium transporter Kup 0.78 BNILDI_19050 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia fergusonii Becca 0.50 EFB2_04886 Low affinity potassium transport system protein kup 0.78 EFB2_02839 Isocitrate dehydrogenase [NADP] — —
Escherichia coli ECOR38 0.50 HEPCGN_13465 kup low affinity potassium transporter Kup 0.78 HEPCGN_24245 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli BL21 0.50 ECD_03631 potassium transporter 0.78 ECD_01134 isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_04306 Low affinity potassium transport system protein kup 0.78 OHPLBJKB_02532 Isocitrate dehydrogenase [NADP] — —
Escherichia coli Nissle 1917 0.50 ECOLIN_RS21545 low affinity potassium transporter Kup 0.78 ECOLIN_RS06640 NADP-dependent isocitrate dehydrogenase — —
Escherichia coli BW25113 0.50 b3747 trkD potassium transporter (NCBI) 0.78 b1136 icd isocitrate dehydrogenase (NCBI) — —
Escherichia coli ECOR27 0.50 NOLOHH_06890 kup low affinity potassium transporter Kup 0.78 NOLOHH_20885 icd NADP-dependent isocitrate dehydrogenase — —
Enterobacter asburiae PDN3 0.50 EX28DRAFT_4023 potassium uptake protein 0.77 EX28DRAFT_1794 isocitrate dehydrogenase (NADP) (EC 1.1.1.42) — —
Variovorax sp. SCN45 0.50 GFF6324 Kup system potassium uptake protein 0.79 GFF343 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 127
Variovorax sp. OAS795 0.50 ABID97_RS04610 potassium transporter Kup 0.79 ABID97_RS16920 NADP-dependent isocitrate dehydrogenase low > 91
Escherichia coli ECRC98 0.50 JDDGAC_18375 kup low affinity potassium transporter Kup 0.78 JDDGAC_06605 icd NADP-dependent isocitrate dehydrogenase low > 86
Escherichia coli ECRC102 0.50 NIAGMN_12510 kup low affinity potassium transporter Kup 0.78 NIAGMN_24905 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECRC100 0.50 OKFHMN_14755 kup low affinity potassium transporter Kup 0.78 OKFHMN_00760 icd NADP-dependent isocitrate dehydrogenase — —
Rahnella sp. WP5 0.50 EX31_RS06165 low affinity potassium transporter Kup 0.77 EX31_RS24590 NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECRC99 0.50 KEDOAH_13395 kup low affinity potassium transporter Kup 0.78 KEDOAH_24845 icd NADP-dependent isocitrate dehydrogenase — —
Escherichia coli ECRC101 0.50 MCAODC_05260 kup low affinity potassium transporter Kup 0.78 MCAODC_22325 icd NADP-dependent isocitrate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS06040 potassium transporter Kup 0.78 QEN71_RS02980 NADP-dependent isocitrate dehydrogenase low > 153
Enterobacter sp. TBS_079 0.50 MPMX20_04620 Low affinity potassium transport system protein kup 0.77 MPMX20_01820 Isocitrate dehydrogenase [NADP] — —
Serratia liquefaciens MT49 0.50 IAI46_25080 low affinity potassium transporter Kup 0.78 IAI46_10460 NADP-dependent isocitrate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF2646 Kup system potassium uptake protein 0.72 GFF4515 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) low > 90
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33235 potassium transporter Kup 0.78 BPHYT_RS15730 isocitrate dehydrogenase low > 109
Klebsiella michiganensis M5al 0.50 BWI76_RS00265 potassium transporter Kup 0.78 BWI76_RS11330 isocitrate dehydrogenase (NADP(+)) — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00529 KUP system potassium uptake protein 0.78 H281DRAFT_04085 isocitrate dehydrogenase (NADP) low > 103
Pantoea sp. MT58 0.49 IAI47_00330 low affinity potassium transporter Kup 0.78 IAI47_11900 NADP-dependent isocitrate dehydrogenase — —
Paraburkholderia graminis OAS925 0.49 ABIE53_002729 KUP system potassium uptake protein 0.77 ABIE53_003317 isocitrate dehydrogenase low > 113
Acinetobacter radioresistens SK82 0.49 MPMX26_02859 Low affinity potassium transport system protein kup 0.78 MPMX26_01012 Isocitrate dehydrogenase [NADP] — —
Dickeya dadantii 3937 0.49 DDA3937_RS00025 low affinity potassium transporter Kup 0.77 DDA3937_RS11470 NADP-dependent isocitrate dehydrogenase — —
Dickeya dianthicola 67-19 0.49 HGI48_RS21355 low affinity potassium transporter Kup 0.76 HGI48_RS11515 NADP-dependent isocitrate dehydrogenase — —
Dickeya dianthicola ME23 0.49 DZA65_RS22335 low affinity potassium transporter Kup 0.76 DZA65_RS11850 NADP-dependent isocitrate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS01560 potassium transporter Kup 0.78 RALBFv3_RS04855 isocitrate dehydrogenase (NADP(+)) — —
Ralstonia solanacearum UW163 0.49 UW163_RS14870 potassium transporter Kup 0.78 UW163_RS08770 isocitrate dehydrogenase (NADP(+)) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF1710 Kup system potassium uptake protein 0.77 GFF3422 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) — —
Ralstonia solanacearum GMI1000 0.48 RS_RS08170 potassium transporter Kup 0.78 RS_RS12485 NADP-dependent isocitrate dehydrogenase — —
Ralstonia solanacearum PSI07 0.48 RPSI07_RS15930 potassium transporter Kup 0.79 RPSI07_RS12425 NADP-dependent isocitrate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS13350 potassium transporter Kup 0.77 ABZR87_RS00460 NADP-dependent isocitrate dehydrogenase — —
Erwinia tracheiphila SCR3 0.47 LU632_RS24840 kup low affinity potassium transporter Kup 0.77 LU632_RS14560 icd NADP-dependent isocitrate dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS00295 potassium transporter Kup 0.75 HSERO_RS07015 isocitrate dehydrogenase — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS06505 potassium transporter Kup 0.77 ABCV34_RS07265 NADP-dependent isocitrate dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.45 DvMF_0985 K potassium transporter (RefSeq) 0.49 DvMF_1739 isocitrate/isopropylmalate dehydrogenase (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_09555 potassium transporter Kup 0.20 CA264_17775 isocitrate dehydrogenase — —

Not shown: 23 genomes with orthologs for PFLU_RS05955 only; 9 genomes with orthologs for PFLU_RS18565 only