Conservation of cofitness between NOLOHH_11130 and NOLOHH_01300 in Escherichia coli ECOR27

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_11130 yggR Uncharacterized protein YggR 1.0 NOLOHH_01300 cyoB cytochrome o ubiquinol oxidase subunit I low > 75
Escherichia coli ECRC62 1.00 BNILDI_09710 yggR Uncharacterized protein YggR 1.00 BNILDI_22715 cyoB cytochrome o ubiquinol oxidase subunit I low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00766 putative protein YggR 1.00 OHPLBJKB_03242 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 73
Escherichia coli ECOR38 0.99 HEPCGN_18565 yggR Uncharacterized protein YggR 1.00 HEPCGN_06980 cyoB cytochrome o ubiquinol oxidase subunit I low > 87
Escherichia coli ECRC99 0.98 KEDOAH_08880 yggR Uncharacterized protein YggR 1.00 KEDOAH_19600 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli ECRC102 0.98 NIAGMN_17025 yggR Uncharacterized protein YggR 1.00 NIAGMN_06420 cyoB cytochrome o ubiquinol oxidase subunit I — —
Escherichia coli ECRC101 0.98 MCAODC_09780 yggR Uncharacterized protein YggR 1.00 MCAODC_27590 cyoB cytochrome o ubiquinol oxidase subunit I low > 87
Escherichia coli BW25113 0.98 b2950 yggR putative protein transport (VIMSS) 1.00 b0431 cyoB cytochrome o ubiquinol oxidase subunit I (NCBI) low > 76
Escherichia coli ECRC100 0.98 OKFHMN_19260 yggR Uncharacterized protein YggR 1.00 OKFHMN_08365 cyoB cytochrome o ubiquinol oxidase subunit I low > 80
Escherichia coli ECRC98 0.98 JDDGAC_22890 yggR Uncharacterized protein YggR 1.00 JDDGAC_12020 cyoB cytochrome o ubiquinol oxidase subunit I low > 86
Escherichia coli BL21 0.98 ECD_02780 putative PilT family AAA+ ATPase 1.00 ECD_00382 cytochrome o ubiquinol oxidase subunit I low > 61
Escherichia fergusonii Becca 0.98 EFB2_00952 putative protein YggR 1.00 EFB2_03626 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS16410 type IV pilus twitching motility protein PilT 1.00 ECOLIN_RS02590 cytochrome o ubiquinol oxidase subunit I low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3053 Twitching motility protein PilT 0.95 GFF4345 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_03808 putative protein YggR 0.95 MPMX20_01022 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2988 pilus retraction protein PilT 0.95 EX28DRAFT_2540 cytochrome o ubiquinol oxidase, subunit I low > 76
Klebsiella michiganensis M5al 0.68 BWI76_RS24095 twitching motility protein PilT 0.94 BWI76_RS06490 cytochrome ubiquinol oxidase subunit I low > 92
Dickeya dadantii 3937 0.60 DDA3937_RS17295 type IV pilus twitching motility protein PilT 0.87 DDA3937_RS05610 cytochrome o ubiquinol oxidase subunit I low > 74
Dickeya dianthicola ME23 0.60 DZA65_RS18430 type IV pilus twitching motility protein PilT 0.87 DZA65_RS05980 cytochrome o ubiquinol oxidase subunit I low > 75
Pantoea sp. MT58 0.60 IAI47_03600 type IV pilus twitching motility protein PilT 0.88 IAI47_14685 cytochrome o ubiquinol oxidase subunit I 0.33 18
Dickeya dianthicola 67-19 0.60 HGI48_RS17340 type IV pilus twitching motility protein PilT 0.87 HGI48_RS05655 cytochrome o ubiquinol oxidase subunit I low > 71
Pectobacterium carotovorum WPP14 0.58 HER17_RS03815 type IV pilus twitching motility protein PilT 0.87 HER17_RS15880 cytochrome o ubiquinol oxidase subunit I low > 75
Rahnella sp. WP5 0.55 EX31_RS02680 type IV pilus twitching motility protein PilT 0.86 EX31_RS22215 cytochrome o ubiquinol oxidase subunit I low > 89
Serratia liquefaciens MT49 0.52 IAI46_21405 type IV pilus twitching motility protein PilT 0.88 IAI46_04980 cytochrome o ubiquinol oxidase subunit I low > 86
Shewanella sp. ANA-3 0.46 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) 0.69 Shewana3_4032 cytochrome c oxidase, subunit I (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.46 MIT1002_03060 Twitching mobility protein 0.67 MIT1002_03928 Ubiquinol oxidase subunit 1 low > 70
Variovorax sp. OAS795 0.45 ABID97_RS00255 type IV pilus twitching motility protein PilT 0.68 ABID97_RS07635 cytochrome o ubiquinol oxidase subunit I low > 91
Shewanella loihica PV-4 0.45 Shew_1138 twitching motility protein (RefSeq) 0.69 Shew_0367 cytochrome-c oxidase (RefSeq) low > 60
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1713.1 Twitching motility protein PilT 0.71 Xcc-8004.3816.1 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 74
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS10420 type IV pilus twitching motility protein PilT 0.66 ABZR86_RS07620 cytochrome o ubiquinol oxidase subunit I low > 74
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01220 type IV pilus twitching motility protein PilT 0.72 ABZR87_RS02330 cytochrome o ubiquinol oxidase subunit I low > 80
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0478 pilus retraction ATPase PilT 0.71 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein — —
Variovorax sp. SCN45 0.45 GFF3743 Twitching motility protein PilT 0.68 GFF5677 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 127
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0478 pilus retraction ATPase PilT 0.71 Psyr_1142 cytochrome bo3 quinol oxidase subunit 1 apoprotein — —
Lysobacter sp. OAE881 0.45 ABIE51_RS16055 type IV pilus twitching motility protein PilT 0.67 ABIE51_RS09770 cytochrome o ubiquinol oxidase subunit I 0.69 4
Acidovorax sp. GW101-3H11 0.45 Ac3H11_4473 Twitching motility protein PilT 0.63 Ac3H11_3142 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) — —
Ralstonia solanacearum PSI07 0.44 RPSI07_RS11730 type IV pili twitching motility protein PilT 0.72 RPSI07_RS10570 cytochrome o ubiquinol oxidase subunit I low > 81
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS17350 twitching motility protein PilT 0.72 RR42_RS32595 cytochrome o ubiquinol oxidase subunit I low > 128
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS05570 type IV pili twitching motility protein PilT 0.71 RALBFv3_RS06655 cytochrome o ubiquinol oxidase subunit I low > 76
Ralstonia solanacearum GMI1000 0.44 RS_RS13430 type IV pili twitching motility protein PilT 0.71 RS_RS14605 cytochrome o ubiquinol oxidase subunit I low > 80
Ralstonia solanacearum UW163 0.44 UW163_RS08055 type IV pili twitching motility protein PilT 0.71 UW163_RS06970 cytochrome o ubiquinol oxidase subunit I — —
Acinetobacter radioresistens SK82 0.44 MPMX26_02405 Twitching mobility protein 0.68 MPMX26_01161 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 36
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2343 Twitching motility protein PilT 0.70 Pf1N1B4_972 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_08155 twitching motility protein PilT 0.70 AO353_15455 cytochrome o ubiquinol oxidase subunit I low > 101
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_13430 twitching motility protein PilT 0.69 AO356_16965 cytochrome o ubiquinol oxidase subunit I low > 104
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1012 Twitching motility protein PilT 0.67 PfGW456L13_4935 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 87
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.72 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.72 PFLU_RS25215 cytochrome o ubiquinol oxidase subunit I low > 109
Pseudomonas sp. RS175 0.43 PFR28_04241 Twitching mobility protein 0.69 PFR28_00243 Cytochrome bo(3) ubiquinol oxidase subunit 1 low > 88
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4602 Twitching motility protein PilT 0.69 Pf6N2E2_5318 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) low > 103
Pseudomonas simiae WCS417 0.43 PS417_26720 twitching motility protein PilT 0.71 PS417_23385 cytochrome o ubiquinol oxidase subunit I low > 88
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS19000 twitching motility protein PilT 0.69 HSERO_RS12315 cytochrome O ubiquinol oxidase — —
Pseudomonas putida KT2440 0.38 PP_5093 twitching motility protein 0.71 PP_0813 cytochrome bo terminal oxidase subunit I — —

Not shown: 17 genomes with orthologs for NOLOHH_11130 only; 19 genomes with orthologs for NOLOHH_01300 only