Conservation of cofitness between IAI47_13295 and IAI47_14910 in Pantoea sp. MT58

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_13295 ATP-dependent DNA helicase DinG 1.0 IAI47_14910 recombination-associated protein RdgC 0.30 16
Erwinia tracheiphila SCR3 0.75 LU632_RS09400 dinG ATP-dependent DNA helicase DinG 0.89 LU632_RS18955 rdgC recombination-associated protein RdgC low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF697 ATP-dependent helicase DinG/Rad3 0.85 GFF4290 DNA recombination-dependent growth factor C low > 78
Escherichia coli ECOR38 0.72 HEPCGN_01765 dinG ATP-dependent DNA helicase DinG 0.84 HEPCGN_07210 rdgC recombination-associated protein RdgC low > 85
Klebsiella michiganensis M5al 0.72 BWI76_RS08920 ATP-dependent DNA helicase DinG 0.85 BWI76_RS06205 recombination-associated protein RdgC low > 92
Escherichia coli ECOR27 0.72 NOLOHH_22630 dinG ATP-dependent DNA helicase DinG 0.84 NOLOHH_01500 rdgC recombination-associated protein RdgC low > 57
Escherichia coli BL21 0.72 ECD_00766 ATP-dependent DNA helicase 0.84 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function low > 60
Escherichia coli ECRC101 0.72 OKFHMN_06280 dinG ATP-dependent DNA helicase DinG 0.84 OKFHMN_08570 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC101 0.72 MCAODC_25495 dinG ATP-dependent DNA helicase DinG 0.84 MCAODC_27795 rdgC recombination-associated protein RdgC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_02914 putative ATP-dependent helicase DinG 0.84 OHPLBJKB_03282 Recombination-associated protein RdgC low > 73
Escherichia coli ECRC98 0.72 JDDGAC_09915 dinG ATP-dependent DNA helicase DinG 0.84 JDDGAC_12225 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC102 0.72 NIAGMN_04325 dinG ATP-dependent DNA helicase DinG 0.84 NIAGMN_06625 rdgC recombination-associated protein RdgC — —
Escherichia coli BW25113 0.72 b0799 dinG ATP-dependent DNA helicase (NCBI) 0.84 b0393 rdgC recombination associated protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.72 ECOLIN_RS04255 ATP-dependent DNA helicase DinG 0.84 ECOLIN_RS02385 recombination-associated protein RdgC — —
Escherichia fergusonii Becca 0.72 EFB2_03306 ATP-dependent DNA helicase DinG 0.84 EFB2_03663 Recombination-associated protein RdgC low > 86
Escherichia coli ECRC62 0.71 BNILDI_20910 dinG ATP-dependent DNA helicase DinG 0.84 BNILDI_22915 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC99 0.71 KEDOAH_21630 dinG ATP-dependent DNA helicase DinG 0.84 KEDOAH_19395 rdgC recombination-associated protein RdgC — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_2193 Rad3-related DNA helicases 0.85 EX28DRAFT_2579 DNA recombination-dependent growth factor C low > 76
Serratia liquefaciens MT49 0.71 IAI46_07445 ATP-dependent DNA helicase DinG 0.86 IAI46_04710 recombination-associated protein RdgC low > 86
Enterobacter sp. TBS_079 0.71 MPMX20_01426 ATP-dependent DNA helicase DinG 0.84 MPMX20_00982 Recombination-associated protein RdgC low > 85
Pectobacterium carotovorum WPP14 0.70 HER17_RS13230 ATP-dependent DNA helicase DinG 0.85 HER17_RS16060 recombination-associated protein RdgC low > 75
Rahnella sp. WP5 0.70 EX31_RS19020 ATP-dependent DNA helicase DinG 0.84 EX31_RS21990 recombination-associated protein RdgC low > 89
Dickeya dadantii 3937 0.68 DDA3937_RS08765 ATP-dependent DNA helicase DinG 0.84 DDA3937_RS05405 recombination-associated protein RdgC low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS08850 ATP-dependent DNA helicase DinG 0.84 HGI48_RS05465 recombination-associated protein RdgC — —
Dickeya dianthicola ME23 0.67 DZA65_RS09155 ATP-dependent DNA helicase DinG 0.84 DZA65_RS05790 recombination-associated protein RdgC low > 75
Shewanella loihica PV-4 0.25 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.51 Shew_2751 rdgC recombination associated protein (RefSeq) 0.43 29
Shewanella sp. ANA-3 0.25 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.50 Shewana3_2881 rdgC recombination associated protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.25 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) 0.50 SO1556 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.24 Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.51 Sama_1072 rdgC recombination associated protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_09290 ATP-dependent DNA helicase DinG 0.58 CSW01_03755 recombination-associated protein RdgC low > 62
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS16845 ATP-dependent DNA helicase DinG 0.30 ABZR86_RS16505 recombination-associated protein RdgC — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.43 PFLU_RS09255 recombination-associated protein RdgC low > 109
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_3856 Helicase c2 0.44 Psyr_1588 Putative exonuclease, RdgC 0.47 36
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_17020 ATP-dependent DNA helicase DinG 0.44 AO353_02515 recombination-associated protein RdgC 0.46 19
Pseudomonas fluorescens SBW25 0.21 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.43 PFLU_RS09255 recombination-associated protein RdgC low > 109
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_12870 dinG ATP-dependent DNA helicase DinG 0.30 OKGIIK_13190 rdgC recombination-associated protein RdgC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_3856 Helicase c2 0.44 Psyr_1588 Putative exonuclease, RdgC low > 86
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.44 Pf6N2E2_5768 DNA recombination-dependent growth factor C 0.18 66
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_05425 ATP-dependent DNA helicase DinG 0.44 AO356_19265 recombination-associated protein RdgC low > 104
Pseudomonas simiae WCS417 0.21 PS417_06510 ATP-dependent DNA helicase DinG 0.43 PS417_09245 recombinase RdgC low > 88
Pseudomonas stutzeri RCH2 0.21 Psest_2857 Rad3-related DNA helicases 0.44 Psest_1532 DNA recombination-dependent growth factor C low > 67
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.43 PfGW456L13_4216 DNA recombination-dependent growth factor C low > 87
Pseudomonas sp. S08-1 0.21 OH686_04830 ATP-dependent helicase DinG/Rad3 0.43 OH686_19640 DNA recombination-dependent growth factor RdgC low > 80
Pseudomonas sp. RS175 0.21 PFR28_00520 ATP-dependent DNA helicase DinG 0.44 PFR28_03182 Recombination-associated protein RdgC 0.15 48
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.5017.1 ATP-dependent helicase DinG/Rad3 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C — —
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS11005 ATP-dependent DNA helicase DinG 0.30 LRK54_RS10690 recombination-associated protein RdgC — —
Rhodanobacter denitrificans MT42 0.20 LRK55_RS10710 ATP-dependent DNA helicase DinG 0.29 LRK55_RS10330 recombination-associated protein RdgC — —
Marinobacter adhaerens HP15 0.20 HP15_1856 helicase c2 0.44 HP15_1221 recombination-associated protein rdgC 0.31 73
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.43 Pf1N1B4_3731 DNA recombination-dependent growth factor C — —
Pseudomonas putida KT2440 0.20 PP_1125 putative Helicase 0.44 PP_1702 Recombination-associated protein RdgC low > 96
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF2695 ATP-dependent helicase DinG/Rad3 0.29 GFF5355 DNA recombination-dependent growth factor C — —

Not shown: 1 genomes with orthologs for IAI47_13295 only; 17 genomes with orthologs for IAI47_14910 only