Conservation of cofitness between IAI46_03280 and IAI46_24985 in Serratia liquefaciens MT49

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03280 DNA polymerase II 1.0 IAI46_24985 DNA polymerase I 0.84 5
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS09335 DNA polymerase II 0.50 RR42_RS15050 DNA polymerase I low > 128
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.55 Psyr_0270 DNA polymerase I low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.55 Psyr_0270 DNA polymerase I low > 86
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_01369 DNA damage-inducible DNA polymerase II 0.49 H281DRAFT_06022 DNA polymerase I low > 103
Paraburkholderia graminis OAS925 0.79 ABIE53_004018 DNA polymerase-2 0.49 ABIE53_004852 DNA polymerase-1 low > 113
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS23105 DNA polymerase 0.49 BPHYT_RS33610 DNA polymerase I low > 109
Pseudomonas sp. RS175 0.77 PFR28_01299 DNA polymerase II 0.57 PFR28_04624 DNA polymerase I low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.57 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.57 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.57 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_29350 DNA polymerase II 0.57 AO353_10930 DNA polymerase I low > 101
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_01325 DNA polymerase II 0.58 AO356_11465 DNA polymerase I low > 104
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS13385 DNA polymerase II 0.50 QEN71_RS17885 DNA polymerase I — —
Rahnella sp. WP5 0.77 EX31_RS03740 DNA polymerase II 0.82 EX31_RS15905 DNA polymerase I low > 89
Pseudomonas stutzeri RCH2 0.76 Psest_1519 DNA polymerase elongation subunit (family B) 0.60 Psest_4219 DNA polymerase I low > 67
Pectobacterium carotovorum WPP14 0.75 HER17_RS02995 DNA polymerase II 0.81 HER17_RS21470 DNA polymerase I — —
Pseudomonas simiae WCS417 0.74 PS417_09565 DNA polymerase II 0.58 PS417_00405 DNA polymerase I low > 88
Pseudomonas sp. S08-1 0.74 OH686_16850 DNA polymerase II 0.58 OH686_12215 DNA polymerase I low > 80
Pseudomonas fluorescens SBW25 0.73 PFLU_RS10185 DNA polymerase II 0.58 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS10185 DNA polymerase II 0.58 PFLU_RS00395 DNA polymerase I low > 109
Dickeya dianthicola 67-19 0.73 HGI48_RS18165 DNA polymerase II 0.78 HGI48_RS21260 DNA polymerase I — —
Dickeya dianthicola ME23 0.73 DZA65_RS19305 DNA polymerase II 0.78 DZA65_RS22235 DNA polymerase I — —
Dickeya dadantii 3937 0.73 DDA3937_RS18230 DNA polymerase II 0.78 DDA3937_RS00105 DNA polymerase I — —
Pseudomonas putida KT2440 0.73 PP_2393 DNA polymerase II 0.58 PP_0123 DNA polymerase I, 5 low > 96
Erwinia tracheiphila SCR3 0.72 LU632_RS02810 polB DNA polymerase II 0.78 LU632_RS23870 polA DNA polymerase I — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF182 DNA polymerase II (EC 2.7.7.7) 0.76 GFF2216 DNA polymerase I (EC 2.7.7.7) low > 78
Pantoea sp. MT58 0.71 IAI47_16050 DNA polymerase II 0.78 IAI47_00430 DNA polymerase I low > 76
Escherichia coli ECOR38 0.71 HEPCGN_08785 polB DNA polymerase II 0.77 HEPCGN_12785 polA DNA polymerase I — —
Escherichia coli BL21 0.71 ECD_00062 DNA polymerase II 0.77 ECD_03749 5 — —
Escherichia coli BW25113 0.71 b0060 polB DNA polymerase II (NCBI) 0.77 b3863 polA DNA polymerase I (NCBI) low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_00754 DNA polymerase II 0.76 MPMX20_04601 DNA polymerase I low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03598 DNA polymerase II 0.77 OHPLBJKB_04189 DNA polymerase I — —
Escherichia fergusonii Becca 0.71 EFB2_03985 DNA polymerase II 0.77 EFB2_04753 DNA polymerase I — —
Escherichia coli ECRC99 0.71 KEDOAH_17360 polB DNA polymerase II 0.77 KEDOAH_14000 polA DNA polymerase I — —
Escherichia coli ECRC101 0.71 MCAODC_01310 polB DNA polymerase II 0.77 MCAODC_04650 polA DNA polymerase I — —
Escherichia coli ECRC102 0.71 NIAGMN_08645 polB DNA polymerase II 0.77 NIAGMN_11905 polA DNA polymerase I — —
Escherichia coli ECRC98 0.71 JDDGAC_14390 polB DNA polymerase II 0.77 JDDGAC_17775 polA DNA polymerase I — —
Escherichia coli ECRC101 0.71 OKFHMN_10795 polB DNA polymerase II 0.77 OKFHMN_14150 polA DNA polymerase I — —
Escherichia coli ECRC62 0.71 BNILDI_08465 polB DNA polymerase II 0.77 BNILDI_05250 polA DNA polymerase I — —
Escherichia coli ECOR27 0.71 NOLOHH_03140 polB DNA polymerase II 0.77 NOLOHH_06280 polA DNA polymerase I — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00320 DNA polymerase II 0.77 ECOLIN_RS22270 DNA polymerase I — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.77 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) — —
Klebsiella michiganensis M5al 0.69 BWI76_RS04575 DNA polymerase II 0.76 BWI76_RS00355 DNA polymerase I low > 92
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS12200 DNA polymerase II 0.52 HSERO_RS02260 DNA polymerase I low > 78
Variovorax sp. SCN45 0.58 GFF7213 DNA polymerase II (EC 2.7.7.7) 0.46 GFF4006 DNA polymerase I (EC 2.7.7.7) low > 127
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_06130 DNA polymerase II 0.66 CSW01_00560 DNA polymerase I low > 62
Alteromonas macleodii MIT1002 0.40 MIT1002_03358 DNA polymerase II 0.65 MIT1002_00014 DNA polymerase I low > 70
Shewanella loihica PV-4 0.39 Shew_2482 DNA polymerase II (RefSeq) 0.63 Shew_3714 DNA polymerase I (RefSeq) low > 60
Shewanella sp. ANA-3 0.39 Shewana3_2629 DNA polymerase II (RefSeq) 0.63 Shewana3_4109 DNA polymerase I (RefSeq) — —
Shewanella amazonensis SB2B 0.39 Sama_1250 DNA polymerase II (RefSeq) 0.64 Sama_0093 DNA-directed DNA polymerase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.38 SO1820 polB DNA polymerase II (NCBI ptt file) 0.63 SO4669 polA DNA polymerase I (NCBI ptt file) — —

Not shown: 2 genomes with orthologs for IAI46_03280 only; 48 genomes with orthologs for IAI46_24985 only