Conservation of cofitness between IAI46_03280 and IAI46_24905 in Serratia liquefaciens MT49

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03280 DNA polymerase II 1.0 IAI46_24905 ATP-dependent DNA helicase RecG 0.86 3
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS09335 DNA polymerase II 0.44 RR42_RS17390 ATP-dependent DNA helicase RecG 0.31 39
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.54 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.54 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_01369 DNA damage-inducible DNA polymerase II 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG low > 103
Paraburkholderia graminis OAS925 0.79 ABIE53_004018 DNA polymerase-2 0.45 ABIE53_000833 ATP-dependent DNA helicase RecG low > 113
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS23105 DNA polymerase 0.45 BPHYT_RS03400 ATP-dependent DNA helicase RecG low > 109
Pseudomonas sp. RS175 0.77 PFR28_01299 DNA polymerase II 0.54 PFR28_04435 ATP-dependent DNA helicase RecG low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.56 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_29350 DNA polymerase II 0.55 AO353_09320 ATP-dependent DNA helicase RecG low > 101
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_01325 DNA polymerase II 0.55 AO356_12380 ATP-dependent DNA helicase RecG low > 104
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS13385 DNA polymerase II 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG — —
Rahnella sp. WP5 0.77 EX31_RS03740 DNA polymerase II 0.88 EX31_RS15820 ATP-dependent DNA helicase RecG low > 89
Pseudomonas stutzeri RCH2 0.76 Psest_1519 DNA polymerase elongation subunit (family B) 0.56 Psest_4192 ATP-dependent DNA helicase RecG — —
Pectobacterium carotovorum WPP14 0.75 HER17_RS02995 DNA polymerase II 0.85 HER17_RS21395 ATP-dependent DNA helicase RecG low > 75
Pseudomonas simiae WCS417 0.74 PS417_09565 DNA polymerase II 0.55 PS417_27870 ATP-dependent DNA helicase RecG low > 88
Pseudomonas sp. S08-1 0.74 OH686_16850 DNA polymerase II 0.55 OH686_13505 ATP-dependent DNA helicase RecG low > 80
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS10185 DNA polymerase II 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS10185 DNA polymerase II 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Dickeya dianthicola 67-19 0.73 HGI48_RS18165 DNA polymerase II 0.83 HGI48_RS21190 ATP-dependent DNA helicase RecG low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS19305 DNA polymerase II 0.83 DZA65_RS22160 ATP-dependent DNA helicase RecG low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS18230 DNA polymerase II 0.84 DDA3937_RS00170 ATP-dependent DNA helicase RecG low > 74
Pseudomonas putida KT2440 0.73 PP_2393 DNA polymerase II 0.56 PP_5310 junction-specific ATP-dependent DNA helicase low > 96
Erwinia tracheiphila SCR3 0.72 LU632_RS02810 polB DNA polymerase II 0.83 LU632_RS22190 recG ATP-dependent DNA helicase RecG low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF182 DNA polymerase II (EC 2.7.7.7) 0.85 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 78
Pantoea sp. MT58 0.71 IAI47_16050 DNA polymerase II 0.85 IAI47_00500 ATP-dependent DNA helicase RecG low > 76
Escherichia coli ECOR38 0.71 HEPCGN_08785 polB DNA polymerase II 0.84 HEPCGN_14365 recG ATP-dependent DNA helicase RecG low > 85
Escherichia coli BL21 0.71 ECD_00062 DNA polymerase II 0.84 ECD_03509 ATP-dependent DNA helicase low > 60
Escherichia coli BW25113 0.71 b0060 polB DNA polymerase II (NCBI) 0.84 b3652 recG ATP-dependent DNA helicase (NCBI) 0.19 50
Enterobacter sp. TBS_079 0.71 MPMX20_00754 DNA polymerase II 0.84 MPMX20_00084 ATP-dependent DNA helicase RecG low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03598 DNA polymerase II 0.84 OHPLBJKB_00049 ATP-dependent DNA helicase RecG low > 73
Escherichia fergusonii Becca 0.71 EFB2_03985 DNA polymerase II 0.84 EFB2_00136 ATP-dependent DNA helicase RecG low > 86
Escherichia coli ECRC101 0.71 MCAODC_01310 polB DNA polymerase II 0.84 MCAODC_06055 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC102 0.71 NIAGMN_08645 polB DNA polymerase II 0.84 NIAGMN_13305 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC99 0.71 KEDOAH_17360 polB DNA polymerase II 0.84 KEDOAH_12600 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC101 0.71 OKFHMN_10795 polB DNA polymerase II 0.84 OKFHMN_15545 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC98 0.71 JDDGAC_14390 polB DNA polymerase II 0.84 JDDGAC_19170 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC62 0.71 BNILDI_08465 polB DNA polymerase II 0.84 BNILDI_04090 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECOR27 0.71 NOLOHH_03140 polB DNA polymerase II 0.84 NOLOHH_07425 recG ATP-dependent DNA helicase RecG low > 57
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00320 DNA polymerase II 0.84 ECOLIN_RS20800 ATP-dependent DNA helicase RecG low > 52
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.84 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 76
Klebsiella michiganensis M5al 0.69 BWI76_RS04575 DNA polymerase II 0.83 BWI76_RS27440 DNA helicase RecG low > 92
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS12200 DNA polymerase II 0.43 HSERO_RS06165 ATP-dependent DNA helicase RecG low > 78
Variovorax sp. SCN45 0.58 GFF7213 DNA polymerase II (EC 2.7.7.7) 0.39 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) low > 127
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_06130 DNA polymerase II 0.67 CSW01_13680 DNA helicase RecG low > 62
Alteromonas macleodii MIT1002 0.40 MIT1002_03358 DNA polymerase II 0.63 MIT1002_00111 ATP-dependent DNA helicase RecG low > 70
Shewanella loihica PV-4 0.39 Shew_2482 DNA polymerase II (RefSeq) 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.32 50
Shewanella sp. ANA-3 0.39 Shewana3_2629 DNA polymerase II (RefSeq) 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) low > 73
Shewanella amazonensis SB2B 0.39 Sama_1250 DNA polymerase II (RefSeq) 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) low > 62
Shewanella oneidensis MR-1 0.38 SO1820 polB DNA polymerase II (NCBI ptt file) 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) low > 76

Not shown: 2 genomes with orthologs for IAI46_03280 only; 46 genomes with orthologs for IAI46_24905 only