Conservation of cofitness between IAI46_21835 and IAI46_22425 in Serratia liquefaciens MT49

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_21835 YgiQ family radical SAM protein 1.0 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.49 5
Klebsiella michiganensis M5al 0.86 BWI76_RS24310 YgiQ family radical SAM protein 0.85 BWI76_RS25225 ABC transporter permease low > 92
Enterobacter sp. TBS_079 0.85 MPMX20_03857 hypothetical protein 0.85 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE low > 85
Escherichia coli Nissle 1917 0.85 ECOLIN_RS17355 YgiQ family radical SAM protein 0.86 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 52
Escherichia fergusonii Becca 0.85 EFB2_00795 hypothetical protein 0.86 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00686 hypothetical protein 0.86 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE low > 73
Escherichia coli ECOR27 0.85 NOLOHH_10695 ygiQ YgiQ family radical SAM protein 0.86 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 57
Escherichia coli BW25113 0.85 b4469 ygiQ hypothetical protein (NCBI) 0.86 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC62 0.85 BNILDI_00820 ygiQ YgiQ family radical SAM protein 0.86 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE — —
Escherichia coli ECRC101 0.85 OKFHMN_18915 ygiQ YgiQ family radical SAM protein 0.86 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE — —
Escherichia coli ECRC101 0.85 MCAODC_09430 ygiQ YgiQ family radical SAM protein 0.86 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE — —
Escherichia coli ECRC102 0.85 NIAGMN_16680 ygiQ YgiQ family radical SAM protein 0.86 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE — —
Escherichia coli ECRC99 0.85 KEDOAH_09230 ygiQ YgiQ family radical SAM protein 0.86 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE — —
Escherichia coli BL21 0.85 ECD_02888 Radical SAM superfamily protein 0.86 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein low > 60
Escherichia coli ECOR38 0.85 HEPCGN_17785 ygiQ YgiQ family radical SAM protein 0.86 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 85
Escherichia coli ECRC98 0.85 JDDGAC_22550 ygiQ YgiQ family radical SAM protein 0.86 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE — —
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3051 uncharacterized radical SAM protein YgiQ 0.85 EX28DRAFT_3248 ABC transport permease subunit low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF3129 Probable Fe-S oxidoreductase family 2 0.85 GFF2938 Uncharacterized ABC transporter, permease component YrbE low > 78
Rahnella sp. WP5 0.84 EX31_RS04200 YgiQ family radical SAM protein 0.91 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 89
Alteromonas macleodii MIT1002 0.72 MIT1002_01793 ribosomal protein S12 methylthiotransferase 0.71 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE low > 70
Shewanella amazonensis SB2B 0.71 Sama_3349 hypothetical protein (RefSeq) 0.73 Sama_3080 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.71 Shew_0233 hypothetical protein (RefSeq) 0.70 Shew_3303 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.70 SO0311 hypothetical Fe-S oxidoreductase (NCBI ptt file) 0.71 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.69 Shewana3_3874 hypothetical protein (RefSeq) 0.71 Shewana3_0679 hypothetical protein (RefSeq) low > 73
Pseudomonas sp. S08-1 0.66 OH686_15955 UPF0313 [4Fe-4S] protein YgiQ 0.66 OH686_08505 Phospholipid ABC transporter permease protein MlaE low > 80
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_08605 YgiQ family radical SAM protein 0.79 CSW01_12770 ABC transporter permease low > 62
Pseudomonas putida KT2440 0.66 PP_4872 putative enzyme of unknown function 0.64 PP_0959 phospholipid ABC transporter low > 96
Pseudomonas stutzeri RCH2 0.65 Psest_0701 uncharacterized radical SAM protein YgiQ 0.66 Psest_3306 conserved hypothetical integral membrane protein low > 67
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_137 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.64 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE — —
Pseudomonas fluorescens SBW25 0.65 PFLU_RS02660 YgiQ family radical SAM protein 0.63 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 109
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS02660 YgiQ family radical SAM protein 0.63 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 109
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_08575 YgiQ family radical SAM protein 0.65 AO356_07000 ABC transporter permease low > 104
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_0587 Radical SAM 0.65 Psyr_4140 Protein of unknown function DUF140 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_0587 Radical SAM 0.65 Psyr_4140 Protein of unknown function DUF140 low > 86
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_13235 YgiQ family radical SAM protein 0.64 AO353_05145 ABC transporter permease low > 101
Pseudomonas simiae WCS417 0.65 PS417_02590 hypothetical protein 0.63 PS417_04380 ABC transporter permease low > 88
Pseudomonas sp. RS175 0.64 PFR28_05137 hypothetical protein 0.65 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE low > 88
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_3600 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.65 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE — —
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1396 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.64 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE — —
Acidovorax sp. GW101-3H11 0.63 Ac3H11_4121 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.53 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF4814 Fe-S OXIDOREDUCTASE (1.8.-.-) 0.49 GFF1324 Uncharacterized ABC transporter, permease component YrbE low > 90
Variovorax sp. SCN45 0.62 GFF1034 UPF0313 [4Fe-4S] protein YgiQ 0.53 GFF5335 Phospholipid ABC transporter permease protein MlaE low > 127
Dechlorosoma suillum PS 0.62 Dsui_2420 uncharacterized radical SAM protein YgiQ 0.53 Dsui_1399 conserved hypothetical integral membrane protein low > 51
Variovorax sp. OAS795 0.62 ABID97_RS14400 YgiQ family radical SAM protein 0.53 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 91
Acinetobacter radioresistens SK82 0.62 MPMX26_00127 hypothetical protein 0.58 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE low > 36
Rhodospirillum rubrum S1H 0.60 Rru_A2003 Radical SAM (NCBI) 0.27 Rru_A0408 Protein of unknown function DUF140 (NCBI) — —
Azospirillum sp. SherDot2 0.59 MPMX19_06038 hypothetical protein 0.29 MPMX19_06141 Intermembrane phospholipid transport system permease protein MlaE low > 112
Parabacteroides merdae CL09T00C40 0.36 HMPREF1078_RS02025 YgiQ family radical SAM protein 0.18 HMPREF1078_RS17075 ABC transporter permease low > 61
Bacteroides stercoris CC31F 0.35 HMPREF1181_RS04635 YgiQ family radical SAM protein 0.17 HMPREF1181_RS07475 ABC transporter permease low > 56
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS15500 YgiQ family radical SAM protein 0.16 HMPREF1058_RS03105 ABC transporter permease low > 67
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS11465 YgiQ family radical SAM protein 0.17 ABI39_RS02350 ABC transporter permease low > 72
Bacteroides ovatus ATCC 8483 0.34 BACOVA_00405 putative radical SAM protein YgiQ 0.16 BACOVA_00331 hypothetical protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.34 BT0254 putative Fe-S oxidoreductase (NCBI ptt file) 0.16 BT3838 conserved hypothetical protein (NCBI ptt file) — —

Not shown: 2 genomes with orthologs for IAI46_21835 only; 36 genomes with orthologs for IAI46_22425 only