Conservation of cofitness between IAI46_21725 and IAI46_18500 in Serratia liquefaciens MT49

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_21725 cystathionine beta-lyase 1.0 IAI46_18500 sulfate/thiosulfate ABC transporter permease CysW 0.78 2
Pectobacterium carotovorum WPP14 0.81 HER17_RS19690 cystathionine beta-lyase 0.72 HER17_RS17215 sulfate/thiosulfate ABC transporter permease CysW low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS01815 cystathionine beta-lyase 0.43 DDA3937_RS15840 sulfate ABC transporter permease subunit CysW low > 74
Dickeya dianthicola ME23 0.80 DZA65_RS01785 cystathionine beta-lyase 0.43 DZA65_RS17065 sulfate ABC transporter permease subunit CysW low > 75
Dickeya dianthicola 67-19 0.80 HGI48_RS01710 cystathionine beta-lyase 0.44 HGI48_RS15980 sulfate ABC transporter permease subunit CysW 0.73 44
Rahnella sp. WP5 0.79 EX31_RS08025 cystathionine beta-lyase 0.85 EX31_RS20215 sulfate/thiosulfate ABC transporter permease CysW 0.41 80
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.83 EX28DRAFT_0207 sulfate ABC transporter, permease protein CysW 0.58 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) 0.83 GFF2057 Sulfate transport system permease protein CysW low > 78
Klebsiella michiganensis M5al 0.76 BWI76_RS24285 cystathionine beta-lyase 0.82 BWI76_RS20695 sulfate/thiosulfate transporter permease subunit low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03852 Cystathionine beta-lyase MetC 0.82 MPMX20_03315 Sulfate transport system permease protein CysW low > 85
Escherichia coli Nissle 1917 0.76 ECOLIN_RS17315 cystathionine beta-lyase 0.82 ECOLIN_RS13910 sulfate/thiosulfate ABC transporter permease CysW low > 52
Escherichia coli ECRC62 0.75 BNILDI_00780 metC cystathionine beta-lyase 0.82 BNILDI_12705 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00693 Cystathionine beta-lyase MetC 0.82 OHPLBJKB_01300 Sulfate transport system permease protein CysW low > 73
Escherichia coli ECOR27 0.75 NOLOHH_10735 metC cystathionine beta-lyase 0.82 NOLOHH_13840 cysW sulfate/thiosulfate ABC transporter permease CysW low > 57
Escherichia fergusonii Becca 0.75 EFB2_00802 Cystathionine beta-lyase MetC 0.82 EFB2_01454 Sulfate transport system permease protein CysW low > 86
Escherichia coli BW25113 0.75 b3008 metC cystathionine beta-lyase (NCBI) 0.82 b2423 cysW sulfate/thiosulfate transporter subunit (NCBI) 0.78 65
Erwinia tracheiphila SCR3 0.75 LU632_RS20545 metC cystathionine beta-lyase 0.76 LU632_RS06685 cysW sulfate/thiosulfate ABC transporter permease CysW 0.80 22
Escherichia coli ECRC102 0.75 NIAGMN_16725 metC cystathionine beta-lyase 0.82 NIAGMN_19930 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli ECRC98 0.75 JDDGAC_22595 metC cystathionine beta-lyase 0.82 JDDGAC_26110 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli ECRC101 0.75 OKFHMN_18960 metC cystathionine beta-lyase 0.82 OKFHMN_22160 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli ECRC99 0.75 KEDOAH_09185 metC cystathionine beta-lyase 0.82 KEDOAH_06060 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli ECRC101 0.75 MCAODC_09475 metC cystathionine beta-lyase 0.82 MCAODC_12690 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli BL21 0.75 ECD_02881 cystathionine beta-lyase, PLP-dependent 0.82 ECD_02323 sulfate/thiosulfate ABC transporter permease low > 60
Pantoea sp. MT58 0.75 IAI47_03215 cystathionine beta-lyase 0.79 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW low > 76
Escherichia coli ECOR38 0.75 HEPCGN_17825 metC cystathionine beta-lyase 0.82 HEPCGN_21335 cysW sulfate/thiosulfate ABC transporter permease CysW 0.72 16
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_08400 cystathionine beta-lyase 0.49 CSW01_02860 sulfate ABC transporter permease subunit CysW low > 62
Shewanella oneidensis MR-1 0.53 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.51 SO3601 cysW-1 sulfate ABC transporter, permease protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.53 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.52 Shewana3_3191 sulfate ABC transporter, inner membrane subunit CysW (RefSeq) low > 73
Magnetospirillum magneticum AMB-1 0.39 AMB_RS06585 cystathionine beta-lyase 0.42 AMB_RS10135 sulfate ABC transporter permease subunit CysW low > 64
Rhizobium sp. OAE497 0.39 ABIE40_RS08820 cystathionine beta-lyase 0.46 ABIE40_RS24580 sulfate ABC transporter permease subunit CysW 0.26 55
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_24330 cystathionine beta-lyase 0.46 AO353_11550 sulfate ABC transporter permease low > 101
Azospirillum brasilense Sp245 0.39 AZOBR_RS08650 cystathionine beta-lyase 0.52 AZOBR_RS19275 sulfate/thiosulfate transporter permease subunit 0.59 57
Rhodospirillum rubrum S1H 0.38 Rru_A1613 Cystathionine beta-lyase (NCBI) 0.44 Rru_A3402 sulfate ABC transporter, permease protein CysW (NCBI) — —
Sinorhizobium meliloti 1021 0.38 SMc02117 cystathionine beta-lyase 0.45 SM_b21131 sulfate ABC transporter permease 0.51 75
Rhodopseudomonas palustris CGA009 0.37 TX73_013235 cystathionine beta-lyase 0.43 TX73_003865 sulfate ABC transporter permease subunit CysW low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF5026 Cystathionine beta-lyase (EC 4.4.1.8) 0.50 GFF5098 Sulfate transport system permease protein CysW low > 90
Agrobacterium fabrum C58 0.37 Atu1575 cystathionine beta lyase 0.50 Atu0822 ABC transporter, membrane spanning protein low > 89
Variovorax sp. SCN45 0.36 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) 0.52 GFF1289 Sulfate transport system permease protein CysW low > 127
Azospirillum sp. SherDot2 0.36 MPMX19_01339 Cystathionine beta-lyase MetC 0.50 MPMX19_04168 Sulfate transport system permease protein CysW low > 112
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_01491 cystathionine beta-lyase 0.45 CCNA_01669 sulfate transport system permease protein cysW low > 67
Caulobacter crescentus NA1000 0.36 CCNA_01491 cystathionine beta-lyase 0.45 CCNA_01669 sulfate transport system permease protein cysW 0.40 21
Variovorax sp. OAS795 0.35 ABID97_RS22430 cystathionine beta-lyase 0.53 ABID97_RS15580 sulfate ABC transporter permease subunit CysW low > 91
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS11250 cystathionine beta-lyase 0.49 ABZR87_RS11545 sulfate ABC transporter permease subunit CysW low > 80
Ralstonia solanacearum PSI07 0.35 RPSI07_RS02185 cystathionine beta-lyase 0.50 RPSI07_RS17395 sulfate ABC transporter permease subunit CysW low > 81
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS07655 cystathionine beta-lyase 0.52 RR42_RS12255 sulfate/thiosulfate transporter permease subunit low > 128
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0607 cystathionine beta-lyase 0.47 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0607 cystathionine beta-lyase 0.47 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS22165 cystathionine beta-lyase 0.47 QEN71_RS22580 sulfate ABC transporter permease subunit CysW low > 153
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS20555 cystathionine beta-lyase 0.49 RALBFv3_RS00090 sulfate ABC transporter permease subunit CysW low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS18620 cystathionine beta-lyase 0.49 UW163_RS13420 sulfate ABC transporter permease subunit CysW — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS14995 cystathionine beta-lyase 0.53 HSERO_RS08235 sulfate ABC transporter permease low > 78
Ralstonia solanacearum GMI1000 0.32 RS_RS08260 cystathionine beta-lyase 0.48 RS_RS06750 sulfate ABC transporter permease subunit CysW low > 80
Castellaniella sp019104865 MT123 0.30 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein 0.46 ABCV34_RS03945 sulfate ABC transporter permease subunit CysW low > 48
Bosea sp. OAE506 0.28 ABIE41_RS01480 cystathionine beta-lyase 0.44 ABIE41_RS15350 sulfate ABC transporter permease subunit CysW low > 77
Acidovorax sp. GW101-3H11 0.26 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8) 0.46 Ac3H11_910 Sulfate transport system permease protein CysW low > 79
Acinetobacter radioresistens SK82 0.22 MPMX26_02724 Cystathionine beta-lyase 0.51 MPMX26_02169 Sulfate transport system permease protein CysW low > 36

Not shown: 6 genomes with orthologs for IAI46_21725 only; 19 genomes with orthologs for IAI46_18500 only