Conservation of cofitness between IAI46_24210 and IAI46_04130 in Serratia liquefaciens MT49

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_24210 oligopeptidase A 1.0 IAI46_04130 murein transglycosylase D 0.74 15
Pectobacterium carotovorum WPP14 0.86 HER17_RS21300 oligopeptidase A 0.73 HER17_RS05450 murein transglycosylase D low > 75
Rahnella sp. WP5 0.86 EX31_RS05165 oligopeptidase A 0.74 EX31_RS21205 murein transglycosylase D low > 89
Enterobacter asburiae PDN3 0.83 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.64 EX28DRAFT_2683 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_04397 Oligopeptidase A 0.64 MPMX20_00896 Membrane-bound lytic murein transglycosylase D low > 85
Escherichia fergusonii Becca 0.83 EFB2_00317 Oligopeptidase A 0.56 EFB2_03832 Membrane-bound lytic murein transglycosylase D low > 86
Escherichia coli BW25113 0.83 b3498 prlC oligopeptidase A (NCBI) 0.62 b0211 mltD predicted membrane-bound lytic murein transglycosylase D (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_00205 Oligopeptidase A 0.57 OHPLBJKB_03450 Membrane-bound lytic murein transglycosylase D low > 73
Escherichia coli ECOR38 0.83 HEPCGN_15325 prlC oligopeptidase A 0.57 HEPCGN_07925 mltD murein transglycosylase D low > 85
Escherichia coli ECOR27 0.83 NOLOHH_08350 prlC oligopeptidase A 0.57 NOLOHH_02330 mltD murein transglycosylase D low > 57
Escherichia coli BL21 0.83 ECD_03347 oligopeptidase A 0.62 ECD_00204 putative membrane-bound lytic murein transglycosylase D low > 60
Escherichia coli ECRC62 0.83 BNILDI_03210 prlC oligopeptidase A 0.57 BNILDI_09340 mltD murein transglycosylase D — —
Escherichia coli ECRC101 0.83 MCAODC_06930 prlC oligopeptidase A 0.57 MCAODC_00500 mltD murein transglycosylase D — —
Escherichia coli ECRC101 0.83 OKFHMN_16415 prlC oligopeptidase A 0.57 OKFHMN_09985 mltD murein transglycosylase D — —
Escherichia coli ECRC99 0.83 KEDOAH_11730 prlC oligopeptidase A 0.57 KEDOAH_18170 mltD murein transglycosylase D — —
Escherichia coli ECRC98 0.83 JDDGAC_20045 prlC oligopeptidase A 0.57 JDDGAC_13580 mltD murein transglycosylase D — —
Escherichia coli ECRC102 0.83 NIAGMN_14180 prlC oligopeptidase A 0.57 NIAGMN_07835 mltD murein transglycosylase D — —
Escherichia coli Nissle 1917 0.83 ECOLIN_RS19985 oligopeptidase A 0.62 ECOLIN_RS01155 murein transglycosylase D low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.59 GFF4043 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 78
Erwinia tracheiphila SCR3 0.83 LU632_RS19470 prlC oligopeptidase A 0.63 LU632_RS01075 mltD murein transglycosylase D low > 74
Klebsiella michiganensis M5al 0.83 BWI76_RS26610 oligopeptidase A 0.63 BWI76_RS05435 murein transglycosylase D low > 92
Dickeya dianthicola ME23 0.82 DZA65_RS00035 oligopeptidase A 0.71 DZA65_RS17270 murein transglycosylase D low > 75
Pantoea sp. MT58 0.82 IAI47_01345 oligopeptidase A 0.67 IAI47_15345 murein transglycosylase D low > 76
Dickeya dadantii 3937 0.82 DDA3937_RS21265 oligopeptidase A 0.71 DDA3937_RS16065 murein transglycosylase D low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS00045 oligopeptidase A 0.71 HGI48_RS16185 murein transglycosylase D low > 71
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_01010 oligopeptidase A 0.35 CSW01_11400 lytic transglycosylase low > 62
Shewanella oneidensis MR-1 0.67 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.30 SO2564 transglycosylase, Slt family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_3657 oligopeptidase A (RefSeq) 0.34 Shew_2115 lytic transglycosylase, catalytic (RefSeq) low > 60
Shewanella sp. ANA-3 0.67 Shewana3_4051 oligopeptidase A (RefSeq) 0.31 Shewana3_2370 MltD domain-containing protein (RefSeq) — —
Shewanella amazonensis SB2B 0.66 Sama_3546 oligopeptidase A (RefSeq) 0.30 Sama_1885 Slt family transglycosylase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_03633 Oligopeptidase A 0.36 MIT1002_02495 Membrane-bound lytic murein transglycosylase D precursor low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases 0.31 B158DRAFT_1060 FOG: LysM repeat low > 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.30 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.30 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N low > 86
Pseudomonas sp. RS175 0.56 PFR28_04699 Oligopeptidase A 0.32 PFR28_01551 Membrane-bound lytic murein transglycosylase D low > 88
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_11120 oligopeptidase A 0.31 AO356_24475 lytic transglycosylase low > 104
Pseudomonas putida KT2440 0.56 PP_0096 oligopeptidase A 0.30 PP_4145 Membrane-bound lytic murein transglycosylase D low > 96
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.32 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 103
Marinobacter adhaerens HP15 0.56 HP15_3759 oligopeptidase A-like protein 0.31 HP15_1806 membrane-bound lytic murein transglycosylase D precursor low > 73
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.30 AO353_23485 lytic transglycosylase low > 101
Pseudomonas simiae WCS417 0.55 PS417_00245 oligopeptidase A 0.31 PS417_12215 lytic transglycosylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS00240 oligopeptidase A 0.30 PFLU_RS12905 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.31 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.36 26
Pseudomonas fluorescens SBW25 0.55 PFLU_RS00240 oligopeptidase A 0.30 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.45 105
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.30 Pf1N1B4_4595 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) — —
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.23 UW163_RS15520 lytic transglycosylase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.23 RALBFv3_RS02210 lytic transglycosylase low > 76
Ralstonia solanacearum PSI07 0.47 RPSI07_RS15795 oligopeptidase A 0.23 RPSI07_RS15235 lytic transglycosylase low > 81
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07340 oligopeptidase A 0.24 RR42_RS13565 lytic transglycosylase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.24 H281DRAFT_04400 membrane-bound lytic murein transglycosylase D low > 103
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13490 M3 family metallopeptidase 0.24 ABZR87_RS14160 transglycosylase SLT domain-containing protein low > 80
Variovorax sp. OAS795 0.45 ABID97_RS14080 M3 family metallopeptidase 0.24 ABID97_RS14725 transglycosylase SLT domain-containing protein low > 91
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.24 Ac3H11_477 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 79

Not shown: 18 genomes with orthologs for IAI46_24210 only; 2 genomes with orthologs for IAI46_04130 only