Conservation of cofitness between IAI46_03280 and IAI46_00770 in Serratia liquefaciens MT49

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03280 DNA polymerase II 1.0 IAI46_00770 ATP-dependent DNA helicase RecQ 0.70 14
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS09335 DNA polymerase II 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.54 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ low > 86
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_01369 DNA damage-inducible DNA polymerase II 0.42 H281DRAFT_06595 ATP-dependent DNA helicase RecQ — —
Paraburkholderia graminis OAS925 0.79 ABIE53_004018 DNA polymerase-2 0.42 ABIE53_003792 ATP-dependent DNA helicase RecQ low > 113
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS23105 DNA polymerase 0.43 BPHYT_RS18145 ATP-dependent DNA helicase RecQ low > 109
Pseudomonas sp. RS175 0.77 PFR28_01299 DNA polymerase II 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ low > 103
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ low > 87
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ low > 87
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_29350 DNA polymerase II 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.50 13
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS13385 DNA polymerase II 0.42 QEN71_RS28295 DNA helicase RecQ low > 153
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_01325 DNA polymerase II 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.27 41
Rahnella sp. WP5 0.77 EX31_RS03740 DNA polymerase II 0.87 EX31_RS15210 ATP-dependent DNA helicase RecQ low > 89
Pseudomonas stutzeri RCH2 0.76 Psest_1519 DNA polymerase elongation subunit (family B) 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.29 10
Pectobacterium carotovorum WPP14 0.75 HER17_RS02995 DNA polymerase II 0.86 HER17_RS01395 ATP-dependent DNA helicase RecQ low > 75
Pseudomonas simiae WCS417 0.74 PS417_09565 DNA polymerase II 0.44 PS417_19950 ATP-dependent DNA helicase RecQ low > 88
Pseudomonas sp. S08-1 0.74 OH686_16850 DNA polymerase II 0.43 OH686_20670 ATP-dependent DNA helicase RecQ low > 80
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS10185 DNA polymerase II 0.45 PFLU_RS21920 DNA helicase RecQ low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS10185 DNA polymerase II 0.45 PFLU_RS21920 DNA helicase RecQ low > 109
Dickeya dianthicola 67-19 0.73 HGI48_RS18165 DNA polymerase II 0.84 HGI48_RS20005 ATP-dependent DNA helicase RecQ low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS19305 DNA polymerase II 0.84 DZA65_RS21045 ATP-dependent DNA helicase RecQ low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS18230 DNA polymerase II 0.83 DDA3937_RS19850 ATP-dependent DNA helicase RecQ low > 74
Pseudomonas putida KT2440 0.73 PP_2393 DNA polymerase II 0.46 PP_4516 ATP-dependent DNA 3 low > 96
Erwinia tracheiphila SCR3 0.72 LU632_RS02810 polB DNA polymerase II 0.82 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF182 DNA polymerase II (EC 2.7.7.7) 0.81 GFF248 ATP-dependent DNA helicase RecQ low > 78
Pantoea sp. MT58 0.71 IAI47_16050 DNA polymerase II 0.83 IAI47_18360 ATP-dependent DNA helicase RecQ low > 76
Escherichia coli ECOR38 0.71 HEPCGN_08785 polB DNA polymerase II 0.81 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ low > 85
Escherichia coli BL21 0.71 ECD_00062 DNA polymerase II 0.81 ECD_03701 ATP-dependent DNA helicase low > 60
Escherichia coli BW25113 0.71 b0060 polB DNA polymerase II (NCBI) 0.82 b3822 recQ ATP-dependent DNA helicase (NCBI) low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_00754 DNA polymerase II 0.83 MPMX20_04458 ATP-dependent DNA helicase RecQ low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03598 DNA polymerase II 0.81 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ low > 73
Escherichia fergusonii Becca 0.71 EFB2_03985 DNA polymerase II 0.81 EFB2_04815 ATP-dependent DNA helicase RecQ low > 86
Escherichia coli ECRC101 0.71 MCAODC_01310 polB DNA polymerase II 0.81 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC102 0.71 NIAGMN_08645 polB DNA polymerase II 0.81 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC99 0.71 KEDOAH_17360 polB DNA polymerase II 0.81 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC101 0.71 OKFHMN_10795 polB DNA polymerase II 0.81 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC98 0.71 JDDGAC_14390 polB DNA polymerase II 0.81 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECOR27 0.71 NOLOHH_03140 polB DNA polymerase II 0.81 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ low > 57
Escherichia coli ECRC62 0.71 BNILDI_08465 polB DNA polymerase II 0.81 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00320 DNA polymerase II 0.82 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ low > 52
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.82 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ low > 76
Klebsiella michiganensis M5al 0.69 BWI76_RS04575 DNA polymerase II 0.82 BWI76_RS01245 DNA helicase RecQ low > 92
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS12200 DNA polymerase II 0.45 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.35 2
Variovorax sp. SCN45 0.58 GFF7213 DNA polymerase II (EC 2.7.7.7) 0.41 GFF6415 ATP-dependent DNA helicase RecQ 0.36 93
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_06130 DNA polymerase II 0.67 CSW01_01045 DNA helicase RecQ low > 62
Alteromonas macleodii MIT1002 0.40 MIT1002_03358 DNA polymerase II 0.54 MIT1002_00148 ATP-dependent DNA helicase RecQ low > 70
Shewanella loihica PV-4 0.39 Shew_2482 DNA polymerase II (RefSeq) 0.57 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.73 9
Shewanella sp. ANA-3 0.39 Shewana3_2629 DNA polymerase II (RefSeq) 0.57 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) low > 73
Shewanella amazonensis SB2B 0.39 Sama_1250 DNA polymerase II (RefSeq) 0.58 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.63 4
Shewanella oneidensis MR-1 0.38 SO1820 polB DNA polymerase II (NCBI ptt file) 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) low > 76

Not shown: 2 genomes with orthologs for IAI46_03280 only; 44 genomes with orthologs for IAI46_00770 only