Conservation of cofitness between IAI46_03280 and IAI46_00735 in Serratia liquefaciens MT49

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03280 DNA polymerase II 1.0 IAI46_00735 DNA helicase II 0.66 17
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS09335 DNA polymerase II 0.42 RR42_RS15090 DNA helicase 0.42 12
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.61 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.61 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Paraburkholderia graminis OAS925 0.79 ABIE53_004018 DNA polymerase-2 0.43 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA — —
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_01369 DNA damage-inducible DNA polymerase II 0.43 H281DRAFT_04469 ATP-dependent DNA helicase UvrD — —
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS23105 DNA polymerase 0.44 BPHYT_RS13840 DNA-dependent helicase — —
Pseudomonas sp. RS175 0.77 PFR28_01299 DNA polymerase II 0.62 PFR28_04523 DNA helicase II low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.62 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA 0.24 19
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.62 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA 0.29 60
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.62 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA low > 87
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_29350 DNA polymerase II 0.62 AO353_10055 DNA helicase II 0.29 84
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_01325 DNA polymerase II 0.62 AO356_11990 DNA helicase II 0.33 19
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS13385 DNA polymerase II 0.43 QEN71_RS05110 3'-5' exonuclease — —
Rahnella sp. WP5 0.77 EX31_RS03740 DNA polymerase II 0.91 EX31_RS15175 DNA helicase II low > 89
Pseudomonas stutzeri RCH2 0.76 Psest_1519 DNA polymerase elongation subunit (family B) 0.61 Psest_4098 Superfamily I DNA and RNA helicases 0.19 63
Pectobacterium carotovorum WPP14 0.75 HER17_RS02995 DNA polymerase II 0.90 HER17_RS01360 DNA helicase II low > 75
Pseudomonas sp. S08-1 0.74 OH686_16850 DNA polymerase II 0.60 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA low > 80
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS10185 DNA polymerase II 0.62 PFLU_RS29900 DNA helicase II low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS10185 DNA polymerase II 0.62 PFLU_RS29900 DNA helicase II low > 109
Dickeya dianthicola 67-19 0.73 HGI48_RS18165 DNA polymerase II 0.89 HGI48_RS20035 DNA helicase II low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS19305 DNA polymerase II 0.89 DZA65_RS21080 DNA helicase II low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS18230 DNA polymerase II 0.89 DDA3937_RS19880 DNA helicase II low > 74
Pseudomonas putida KT2440 0.73 PP_2393 DNA polymerase II 0.62 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex low > 96
Erwinia tracheiphila SCR3 0.72 LU632_RS02810 polB DNA polymerase II 0.89 LU632_RS24125 uvrD DNA helicase II — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF182 DNA polymerase II (EC 2.7.7.7) 0.90 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Pantoea sp. MT58 0.71 IAI47_16050 DNA polymerase II 0.88 IAI47_18390 DNA helicase II low > 76
Escherichia coli BL21 0.71 ECD_00062 DNA polymerase II 0.90 ECD_03689 DNA-dependent ATPase I and helicase II — —
Escherichia coli ECOR38 0.71 HEPCGN_08785 polB DNA polymerase II 0.90 HEPCGN_13115 uvrD DNA helicase II low > 85
Escherichia coli BW25113 0.71 b0060 polB DNA polymerase II (NCBI) 0.90 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) 0.37 13
Enterobacter sp. TBS_079 0.71 MPMX20_00754 DNA polymerase II 0.89 MPMX20_04463 DNA helicase II low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03598 DNA polymerase II 0.90 OHPLBJKB_04237 DNA helicase II low > 73
Escherichia coli ECRC101 0.71 MCAODC_01310 polB DNA polymerase II 0.90 MCAODC_04915 uvrD DNA helicase II — —
Escherichia coli ECRC101 0.71 OKFHMN_10795 polB DNA polymerase II 0.90 OKFHMN_14410 uvrD DNA helicase II — —
Escherichia coli ECRC99 0.71 KEDOAH_17360 polB DNA polymerase II 0.90 KEDOAH_13740 uvrD DNA helicase II — —
Escherichia fergusonii Becca 0.71 EFB2_03985 DNA polymerase II 0.90 EFB2_04824 DNA helicase II low > 86
Escherichia coli ECRC102 0.71 NIAGMN_08645 polB DNA polymerase II 0.90 NIAGMN_12165 uvrD DNA helicase II — —
Escherichia coli ECRC98 0.71 JDDGAC_14390 polB DNA polymerase II 0.90 JDDGAC_18035 uvrD DNA helicase II — —
Escherichia coli ECRC62 0.71 BNILDI_08465 polB DNA polymerase II 0.90 BNILDI_04995 uvrD DNA helicase II — —
Escherichia coli ECOR27 0.71 NOLOHH_03140 polB DNA polymerase II 0.90 NOLOHH_06540 uvrD DNA helicase II low > 57
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00320 DNA polymerase II 0.90 ECOLIN_RS21885 DNA helicase II low > 52
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.89 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Klebsiella michiganensis M5al 0.69 BWI76_RS04575 DNA polymerase II 0.90 BWI76_RS01220 DNA-dependent helicase II low > 92
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS12200 DNA polymerase II 0.43 HSERO_RS02160 DNA-dependent helicase low > 78
Variovorax sp. SCN45 0.58 GFF7213 DNA polymerase II (EC 2.7.7.7) 0.41 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) low > 127
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_06130 DNA polymerase II 0.71 CSW01_01015 DNA helicase II low > 62
Alteromonas macleodii MIT1002 0.40 MIT1002_03358 DNA polymerase II 0.67 MIT1002_00153 DNA helicase II low > 70
Shewanella loihica PV-4 0.39 Shew_2482 DNA polymerase II (RefSeq) 0.72 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) 0.45 27
Shewanella sp. ANA-3 0.39 Shewana3_2629 DNA polymerase II (RefSeq) 0.71 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) low > 73
Shewanella amazonensis SB2B 0.39 Sama_1250 DNA polymerase II (RefSeq) 0.70 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) low > 62
Shewanella oneidensis MR-1 0.38 SO1820 polB DNA polymerase II (NCBI ptt file) 0.71 SO0467 uvrD DNA helicase II (NCBI ptt file) low > 76

Not shown: 3 genomes with orthologs for IAI46_03280 only; 42 genomes with orthologs for IAI46_00735 only