Conservation of cofitness between HSERO_RS21280 and HSERO_RS21710 in Herbaspirillum seropedicae SmR1

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21280 allantoinase 1.0 HSERO_RS21710 antibiotic resistance protein MarC 0.29 12
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS15095 allantoinase PuuE 0.16 ABZR87_RS02485 MarC family protein low > 80
Ralstonia solanacearum UW163 0.84 UW163_RS10480 allantoinase PuuE 0.17 UW163_RS06785 membrane protein — —
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS03245 allantoinase PuuE 0.17 RALBFv3_RS06830 membrane protein — —
Ralstonia solanacearum PSI07 0.84 RPSI07_RS14065 allantoinase PuuE 0.15 RPSI07_RS10405 membrane protein — —
Ralstonia solanacearum GMI1000 0.83 RS_RS10635 allantoinase PuuE 0.17 RS_RS14775 membrane protein — —
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS05255 allantoinase 0.15 RR42_RS18900 membrane protein low > 128
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_05158 putative urate catabolism protein 0.29 H281DRAFT_02837 multiple antibiotic resistance protein low > 103
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS07020 allantoinase PuuE 0.31 QEN71_RS08795 MarC family protein low > 153
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS11555 allantoinase 0.29 BPHYT_RS26390 antibiotic resistance protein low > 109
Serratia liquefaciens MT49 0.76 IAI46_04175 allantoinase PuuE 0.21 IAI46_10930 MarC family NAAT transporter — —
Castellaniella sp019104865 MT123 0.75 ABCV34_RS06095 allantoinase PuuE 0.17 ABCV34_RS00685 MarC family protein low > 48
Dickeya dadantii 3937 0.75 DDA3937_RS16690 allantoinase PuuE 0.16 DDA3937_RS10370 YchE family NAAT transporter low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS17850 allantoinase PuuE 0.16 DZA65_RS10850 YchE family NAAT transporter low > 75
Pectobacterium carotovorum WPP14 0.74 HER17_RS17765 allantoinase PuuE 0.22 HER17_RS05025 MarC family NAAT transporter low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS16775 allantoinase PuuE 0.16 HGI48_RS10375 YchE family NAAT transporter low > 71
Pantoea sp. MT58 0.73 IAI47_15300 allantoinase PuuE 0.23 IAI47_16695 MarC family NAAT transporter low > 76
Variovorax sp. SCN45 0.73 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) 0.16 GFF3614 UPF0056 inner membrane protein YchE low > 127
Acidovorax sp. GW101-3H11 0.73 Ac3H11_1095 Uricase (urate oxidase) (EC 1.7.3.3) 0.17 Ac3H11_2153 Multiple antibiotic resistance (MarC) -related proteins low > 79
Variovorax sp. OAS795 0.72 ABID97_RS22210 allantoinase PuuE 0.16 ABID97_RS00755 MarC family protein low > 91
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1944 putative urate catabolism protein 0.21 EX28DRAFT_1204 membrane protein, MarC family low > 76
Rahnella sp. WP5 0.72 EX31_RS21150 allantoinase PuuE 0.18 EX31_RS14080 MarC family NAAT transporter low > 89
Klebsiella michiganensis M5al 0.71 BWI76_RS10540 allantoinase 0.23 BWI76_RS15285 stress protection protein MarC low > 92
Enterobacter sp. TBS_079 0.71 MPMX20_01662 hypothetical protein 0.20 MPMX20_02261 hypothetical protein low > 85
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3309 Uricase (urate oxidase) (EC 1.7.3.3) 0.39 GFF2690 Multiple antibiotic resistance protein marC low > 90
Pseudomonas putida KT2440 0.66 PP_4286 allantoinase 0.13 PP_4825 Membrane protein, MarC family low > 96
Azospirillum sp. SherDot2 0.64 MPMX19_04444 hypothetical protein 0.25 MPMX19_05781 hypothetical protein low > 112
Pseudomonas sp. RS175 0.64 PFR28_03143 hypothetical protein 0.15 PFR28_05211 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_5805 Uricase (urate oxidase) (EC 1.7.3.3) 0.14 Pf6N2E2_3525 membrane protein, MarC family low > 103
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4180 Uricase (urate oxidase) (EC 1.7.3.3) 0.14 PfGW456L13_60 membrane protein, MarC family low > 87
Pseudomonas fluorescens SBW25 0.64 PFLU_RS21385 allantoinase PuuE 0.13 PFLU_RS03000 MarC family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS21385 allantoinase PuuE 0.13 PFLU_RS03000 MarC family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_19460 allantoinase (EC 3.5.2.5) (from data) 0.14 AO356_08255 hypothetical protein low > 104
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1809 Polysaccharide deacetylase 0.13 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1809 Polysaccharide deacetylase 0.13 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein low > 86
Pseudomonas simiae WCS417 0.64 PS417_19415 allantoinase 0.13 PS417_02925 membrane protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_02320 allantoinase 0.14 AO353_13635 hypothetical protein low > 101
Azospirillum brasilense Sp245 0.63 AZOBR_RS14190 chitin deacetylase 0.26 AZOBR_RS31980 membrane protein 0.52 19
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3766 Uricase (urate oxidase) (EC 1.7.3.3) 0.14 Pf1N1B4_1320 membrane protein, MarC family low > 87
Alteromonas macleodii MIT1002 0.63 MIT1002_01577 putative urate catabolism protein 0.15 MIT1002_03685 putative antibiotic transporter low > 70
Caulobacter crescentus NA1000 0.60 CCNA_02688 PuuE-related allantoinase 0.24 CCNA_01734 MarC family integral membrane protein low > 66
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_02688 PuuE-related allantoinase 0.24 CCNA_01734 MarC family integral membrane protein low > 67
Agrobacterium fabrum C58 0.56 Atu2328 hypothetical protein 0.16 Atu1508 hypothetical protein low > 89
Rhizobium sp. OAE497 0.56 ABIE40_RS13840 allantoinase PuuE 0.17 ABIE40_RS09370 MarC family protein low > 107
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.362.1 Uricase (urate oxidase) (EC 1.7.3.3) 0.13 Xcc-8004.2016.1 FIG01210190: hypothetical protein — —

Not shown: 1 genomes with orthologs for HSERO_RS21280 only; 45 genomes with orthologs for HSERO_RS21710 only