Conservation of cofitness between HSERO_RS16630 and HSERO_RS19810 in Herbaspirillum seropedicae SmR1

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16630 sodium:proton antiporter 1.0 HSERO_RS19810 excinuclease ABC subunit A 0.31 13
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS02000 sodium:proton antiporter 0.80 BPHYT_RS02970 excinuclease ABC subunit A low > 109
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_02125 sodium/proton antiporter, CPA1 family 0.79 H281DRAFT_01913 Excinuclease ABC subunit A low > 103
Paraburkholderia graminis OAS925 0.45 ABIE53_000546 Na+/H+ antiporter 0.79 ABIE53_000732 excinuclease ABC subunit A low > 113
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF1446 Putative Na(+)/H(+) exchanger protein, CPA1 family precursor 0.67 GFF1429 Excinuclease ABC subunit A low > 78
Erwinia tracheiphila SCR3 0.44 LU632_RS23275 Na+/H+ antiporter 0.66 LU632_RS23685 uvrA excinuclease ABC subunit UvrA low > 74
Pectobacterium carotovorum WPP14 0.44 HER17_RS17750 Na+/H+ antiporter 0.67 HER17_RS03550 excinuclease ABC subunit UvrA low > 75
Pantoea sp. MT58 0.44 IAI47_17750 Na+/H+ antiporter 0.67 IAI47_17815 excinuclease ABC subunit UvrA low > 76
Escherichia coli BW25113 0.43 b4065 yjcE predicted cation/proton antiporter (NCBI) 0.67 b4058 uvrA excinuclease ABC subunit A (NCBI) low > 76
Escherichia coli ECOR27 0.43 NOLOHH_05105 yjcE Na+/H+ antiporter 0.67 NOLOHH_05145 uvrA excinuclease ABC subunit UvrA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03976 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.67 OHPLBJKB_03983 UvrABC system protein A low > 73
Escherichia coli ECRC98 0.43 JDDGAC_16490 yjcE Na+/H+ antiporter 0.67 JDDGAC_16530 uvrA excinuclease ABC subunit UvrA low > 86
Escherichia coli BL21 0.43 ECD_03937 putative cation/proton antiporter 0.66 ECD_03930 ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC low > 61
Escherichia coli ECRC102 0.43 NIAGMN_10700 yjcE Na+/H+ antiporter 0.67 NIAGMN_10740 uvrA excinuclease ABC subunit UvrA
Escherichia coli ECRC100 0.43 OKFHMN_12855 yjcE Na+/H+ antiporter 0.67 OKFHMN_12895 uvrA excinuclease ABC subunit UvrA low > 80
Escherichia coli ECRC101 0.43 MCAODC_03365 yjcE Na+/H+ antiporter 0.67 MCAODC_03405 uvrA excinuclease ABC subunit UvrA low > 87
Escherichia coli ECRC99 0.43 KEDOAH_15295 yjcE Na+/H+ antiporter 0.67 KEDOAH_15255 uvrA excinuclease ABC subunit UvrA
Escherichia coli ECRC62 0.43 BNILDI_06420 yjcE Na+/H+ antiporter 0.67 BNILDI_06380 uvrA excinuclease ABC subunit UvrA low > 75
Serratia liquefaciens MT49 0.43 IAI46_22835 Na+/H+ antiporter 0.68 IAI46_22905 excinuclease ABC subunit UvrA low > 86
Escherichia coli ECOR38 0.43 HEPCGN_11470 nhaP Na+/H+ antiporter 0.67 HEPCGN_11510 uvrA excinuclease ABC subunit UvrA low > 87
Escherichia fergusonii Becca 0.43 EFB2_04526 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.67 EFB2_04533 UvrABC system protein A low > 86
Escherichia coli Nissle 1917 0.43 ECOLIN_RS23520 Na+/H+ antiporter 0.67 ECOLIN_RS23485 excinuclease ABC subunit UvrA low > 55
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4238 Na+/H+ antiporter, bacterial form 0.66 EX28DRAFT_4246 excinuclease ABC, A subunit low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_00285 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.66 MPMX20_00276 UvrABC system protein A low > 85
Klebsiella michiganensis M5al 0.43 BWI76_RS02020 Na+/H+ antiporter 0.67 BWI76_RS01950 excinuclease ABC subunit A low > 92
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS00930 Na+/H+ antiporter 0.80 QEN71_RS01825 excinuclease ABC subunit UvrA low > 153
Rahnella sp. WP5 0.42 EX31_RS12120 Na+/H+ antiporter 0.67 EX31_RS11990 excinuclease ABC subunit UvrA low > 89
Dickeya dadantii 3937 0.41 DDA3937_RS03465 Na+/H+ antiporter 0.67 DDA3937_RS17605 excinuclease ABC subunit UvrA low > 74
Dickeya dianthicola ME23 0.40 DZA65_RS03680 Na+/H+ antiporter 0.67 DZA65_RS18735 excinuclease ABC subunit UvrA low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS03565 Na+/H+ antiporter 0.67 HGI48_RS17610 excinuclease ABC subunit UvrA low > 71
Pseudomonas simiae WCS417 0.39 PS417_06190 sodium:proton antiporter 0.70 PS417_25395 excinuclease ABC subunit A low > 88
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_06060 sodium:proton antiporter 0.70 AO356_14785 ABC-ATPase UvrA low > 104
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3075 Na+/H+ antiporter 0.70 Pf6N2E2_4888 Excinuclease ABC subunit A low > 103
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4714 Na+/H+ antiporter 0.70 PfGW456L13_1283 Excinuclease ABC subunit A low > 87
Pseudomonas sp. RS175 0.38 PFR28_00392 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.70 PFR28_03974 UvrABC system protein A low > 88
Pseudomonas fluorescens SBW25 0.38 PFLU_RS06255 Na+/H+ antiporter 0.70 PFLU_RS27025 excinuclease ABC subunit UvrA low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS06255 Na+/H+ antiporter 0.70 PFLU_RS27025 excinuclease ABC subunit UvrA low > 109
Pseudomonas putida KT2440 0.37 PP_1587 NhaP-type Na+/H+ and K+/H+ antiporters 0.70 PP_0483 excinuclease (uvrABC system protein A)
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.4639.1 Na+/H+ antiporter 0.67 Xcc-8004.3830.1 Excinuclease ABC subunit A low > 74
Rhodanobacter denitrificans MT42 0.35 LRK55_RS15505 Na+/H+ antiporter 0.67 LRK55_RS14925 excinuclease ABC subunit UvrA low > 63
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS15750 Na+/H+ antiporter 0.67 LRK54_RS15210 excinuclease ABC subunit UvrA low > 59
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_04395 nhaP Na+/H+ antiporter 0.67 OKGIIK_03980 uvrA excinuclease ABC subunit UvrA low > 52
Rhodospirillum rubrum S1H 0.33 Rru_A3545 Na+/H+ antiporter (NCBI) 0.59 Rru_A1752 Excinuclease ABC, A subunit (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS04840 Na+/H+ antiporter 0.58 A4249_RS08575 excinuclease ABC subunit UvrA low > 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS09045 Na+/H+ antiporter 0.47 ABZR88_RS18670 excinuclease ABC subunit UvrA low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS10130 Na+/H+ antiporter 0.49 CA265_RS25080 excinuclease ABC subunit A low > 88
Agrobacterium fabrum C58 0.17 Atu3059 Na+/H+ antiporter 0.57 Atu1513 ABC excinuclease subunit A low > 89
Rhodopseudomonas palustris CGA009 0.15 TX73_002695 Na+/H+ antiporter 0.56 TX73_014580 excinuclease ABC subunit UvrA low > 86
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS03665 sodium:proton antiporter 0.67 ABZR86_RS00910 excinuclease ABC subunit UvrA low > 74
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS25080 sodium:proton antiporter 0.79 RR42_RS02145 excinuclease ABC subunit A low > 128
Azospirillum sp. SherDot2 0.13 MPMX19_03632 Sodium, potassium, lithium and rubidium/H(+) antiporter 0.59 MPMX19_01152 UvrABC system protein A low > 112
Mycobacterium tuberculosis H37Rv 0.12 Rv2287 Probable conserved integral membrane transport protein YjcE 0.54 Rv1638 Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA low > 58
Synechococcus elongatus PCC 7942 0.09 Synpcc7942_0811 nha1 Na+/H+ antiporter 0.52 Synpcc7942_0848 uvrA excinuclease ABC subunit A low > 38
Rhizobium sp. OAE497 0.08 ABIE40_RS24280 cation:proton antiporter 0.58 ABIE40_RS09360 excinuclease ABC subunit UvrA low > 107

Not shown: 0 genomes with orthologs for HSERO_RS16630 only; 49 genomes with orthologs for HSERO_RS19810 only