| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS15005 | | ribosomal protein S12 methylthiotransferase | 1.0 | HSERO_RS17210 | | ABC transporter | 0.36 | 11 |
| Paraburkholderia sabiae LMG 24235 | 0.80 | QEN71_RS22185 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.57 | QEN71_RS20770 | | ABC transporter transmembrane domain-containing protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.79 | BPHYT_RS09170 | | ribosomal protein S12 methylthiotransferase RimO | 0.57 | BPHYT_RS20895 | | ABC transporter | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.72 | GFF4923 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.55 | GFF3699 | | ABC transporter ATP-binding protein | low | > 90 |
| Variovorax sp. SCN45 | 0.71 | GFF400 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) | 0.53 | GFF4767 | | Efflux ABC transporter, permease/ATP-binding protein | low | > 127 |
| Variovorax sp. OAS795 | 0.71 | ABID97_RS17220 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.53 | ABID97_RS20410 | | ABC transporter transmembrane domain-containing protein | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.70 | Ac3H11_364 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.51 | Ac3H11_1436 | | ABC transporter, ATP binding/permease protein | low | > 79 |
| Marinobacter adhaerens HP15 | 0.66 | HP15_2459 | | MiaB-like tRNA modifying enzyme YliG | 0.41 | HP15_3709 | | lipid A ABC transporter ATPase/inner membrane protein | low | > 73 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_00486 | | Ribosomal protein S12 methylthiotransferase RimO | 0.43 | PFR28_01105 | | Lipid A export ATP-binding/permease protein MsbA | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_1392 | | SSU ribosomal protein S12P methylthiotransferase | 0.44 | Psyr_1830 | | ABC transporter, transmembrane region:ABC transporter | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_1392 | | SSU ribosomal protein S12P methylthiotransferase | 0.44 | Psyr_1830 | | ABC transporter, transmembrane region:ABC transporter | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_16875 | | ribosomal protein S12 methylthiotransferase RimO | 0.41 | AO353_00535 | | ABC transporter ATP-binding protein | low | > 101 |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_01933 | | Ribosomal protein S12 methylthiotransferase RimO | 0.41 | MIT1002_01305 | | Putative multidrug export ATP-binding/permease protein | low | > 70 |
| Azospirillum sp. SherDot2 | 0.62 | MPMX19_05761 | | Ribosomal protein S12 methylthiotransferase RimO | 0.52 | MPMX19_01923 | | Putative multidrug export ATP-binding/permease protein | low | > 112 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_3160 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.42 | Pf1N1B4_3896 | | Lipid A export ATP-binding/permease protein MsbA | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_4653 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.42 | PfGW456L13_4046 | | Lipid A export ATP-binding/permease protein MsbA | low | > 87 |
| Lysobacter sp. OAE881 | 0.61 | ABIE51_RS08160 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.44 | ABIE51_RS13785 | | ABC transporter transmembrane domain-containing protein | low | > 62 |
| Pseudomonas fluorescens SBW25-INTG | 0.61 | PFLU_RS05950 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.43 | PFLU_RS07625 | | ABC transporter ATP-binding protein/permease | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.61 | PFLU_RS05950 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.43 | PFLU_RS07625 | | ABC transporter ATP-binding protein/permease | low | > 109 |
| Rhodanobacter denitrificans MT42 | 0.61 | LRK55_RS01560 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.46 | LRK55_RS16835 | | ABC transporter transmembrane domain-containing protein | low | > 63 |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_2978 | | Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase | 0.43 | Pf6N2E2_2295 | | Lipid A export ATP-binding/permease protein MsbA | low | > 103 |
| Rhodanobacter denitrificans FW104-10B01 | 0.61 | LRK54_RS01780 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.48 | LRK54_RS17125 | | ABC transporter transmembrane domain-containing protein | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.61 | ABZR86_RS08100 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.49 | ABZR86_RS07060 | | ABC transporter transmembrane domain-containing protein | low | > 74 |
| Pseudomonas fluorescens FW300-N2C3 | 0.61 | AO356_05600 | | ribosomal protein S12 methylthiotransferase RimO | 0.42 | AO356_02355 | | ABC transporter ATP-binding protein | low | > 104 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_05880 | | ribosomal protein S12 methylthiotransferase | 0.43 | PS417_07545 | | ABC transporter ATP-binding protein | low | > 88 |
| Pseudomonas sp. S08-1 | 0.61 | OH686_18875 | | ribosomal protein S12 methylthiotransferase RimO | 0.43 | OH686_02040 | | Efflux ABC transporter, permease/ATP-binding protein | low | > 80 |
| Pseudomonas putida KT2440 | 0.61 | PP_1197 | | ribosomal protein S12 methylthiotransferase | 0.42 | PP_2119 | | putative ABC efflux transporter, permease/ATP-binding protein | low | > 96 |
| Shewanella sp. ANA-3 | 0.60 | Shewana3_3627 | | MiaB-like tRNA modifying enzyme YliG (RefSeq) | 0.42 | Shewana3_3232 | | lipid ABC transporter ATPase/inner membrane protein (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.60 | Sama_0485 | | MiaB-like putative RNA modifying enzyme YliG (RefSeq) | 0.41 | Sama_2908 | | ABC transporter, ATP-binding/permease protein, putative (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.60 | SO4072 | yliG | MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) | 0.43 | SO3665 | | ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.60 | OKGIIK_04755 | rimO | 30S ribosomal protein S12 methylthiotransferase RimO | 0.47 | OKGIIK_07760 | mdlB | ABC transporter | low | > 52 |
| Rhodopseudomonas palustris CGA009 | 0.58 | TX73_013865 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.46 | TX73_004740 | | ABC transporter transmembrane domain-containing protein | — | — |
| Bosea sp. OAE506 | 0.57 | ABIE41_RS15895 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.40 | ABIE41_RS09345 | | ABC transporter transmembrane domain-containing protein | low | > 77 |
| Sphingomonas koreensis DSMZ 15582 | 0.57 | Ga0059261_0282 | | ribosomal protein S12 methylthiotransferase RimO | 0.45 | Ga0059261_3276 | | ABC-type multidrug transport system, ATPase and permease components | low | > 68 |
| Phaeobacter inhibens DSM 17395 | 0.55 | PGA1_c24370 | | ribosomal protein S12 methylthiotransferase RimO | 0.47 | PGA1_c22190 | | lipid A export ATP-binding/permease protein MsbA | — | — |
| Dinoroseobacter shibae DFL-12 | 0.54 | Dshi_2618 | | MiaB-like tRNA modifying enzyme YliG (RefSeq) | 0.43 | Dshi_0852 | | lipid A ABC exporter family, fused ATPase and inner membrane subunits (RefSeq) | low | > 64 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.30 | Echvi_0564 | | ribosomal protein S12 methylthiotransferase RimO | 0.35 | Echvi_1191 | | ABC-type multidrug transport system, ATPase and permease components | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.30 | CA264_15685 | | 30S ribosomal protein S12 methylthiotransferase RimO | 0.36 | CA264_12740 | | multidrug ABC transporter ATP-binding protein | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.24 | DvMF_1701 | | MiaB-like tRNA modifying enzyme YliG (RefSeq) | 0.31 | DvMF_0367 | | ABC transporter related (RefSeq) | — | — |
Not shown: 49 genomes with orthologs for HSERO_RS15005 only; 7 genomes with orthologs for HSERO_RS17210 only