Conservation of cofitness between HSERO_RS23825 and HSERO_RS17185 in Herbaspirillum seropedicae SmR1

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23825 hypothetical protein 1.0 HSERO_RS17185 2-isopropylmalate synthase 0.46 16
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.63 BPHYT_RS13280 2-isopropylmalate synthase low > 109
Paraburkholderia graminis OAS925 0.28 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.63 ABIE53_002867 2-isopropylmalate synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.64 H281DRAFT_00385 2-isopropylmalate synthase low > 103
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.63 ABZR87_RS22365 2-isopropylmalate synthase low > 80
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.59 QEN71_RS01640 2-isopropylmalate synthase low > 153
Ralstonia solanacearum GMI1000 0.25 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.62 RS_RS18695 2-isopropylmalate synthase 2 low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.63 RPSI07_RS01320 2-isopropylmalate synthase low > 81
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.64 RALBFv3_RS21840 2-isopropylmalate synthase low > 76
Ralstonia solanacearum UW163 0.24 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.64 UW163_RS17345 2-isopropylmalate synthase — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.71 RR42_RS21205 2-isopropylmalate synthase low > 128
Dechlorosoma suillum PS 0.21 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein 0.62 Dsui_3227 2-isopropylmalate synthase low > 51
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.67 Pf1N1B4_847 2-isopropylmalate synthase (EC 2.3.3.13) low > 87
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.66 AO353_15925 2-isopropylmalate synthase low > 101
Pseudomonas stutzeri RCH2 0.19 Psest_1634 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.66 Psest_1277 2-isopropylmalate synthase, yeast type low > 67
Klebsiella michiganensis M5al 0.19 BWI76_RS20410 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.53 BWI76_RS22105 2-isopropylmalate synthase low > 92
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.67 PfGW456L13_4854 2-isopropylmalate synthase (EC 2.3.3.13) low > 87
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.67 AO356_06550 2-isopropylmalate synthase low > 104
Pseudomonas sp. S08-1 0.19 OH686_20990 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.65 OH686_17570 2-isopropylmalate synthase low > 80
Enterobacter asburiae PDN3 0.18 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.55 EX28DRAFT_2770 2-isopropylmalate synthase, yeast type low > 76
Pseudomonas sp. RS175 0.18 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.67 PFR28_00305 2-isopropylmalate synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.67 Pf6N2E2_3170 2-isopropylmalate synthase (EC 2.3.3.13) low > 103
Serratia liquefaciens MT49 0.18 IAI46_18000 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.56 IAI46_09630 2-isopropylmalate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.65 Psyr_1257 2-isopropylmalate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.65 Psyr_1257 2-isopropylmalate synthase low > 86
Enterobacter sp. TBS_079 0.17 MPMX20_03259 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.55 MPMX20_03565 2-isopropylmalate synthase low > 85
Pseudomonas simiae WCS417 0.17 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.65 PS417_23110 2-isopropylmalate synthase low > 88
Pseudomonas putida KT2440 0.17 PP_1751 methyltransferase/FAD-dependent oxidoreductase 0.65 PP_1025 2-isopropylmalate synthase low > 96
Marinobacter adhaerens HP15 0.17 HP15_1540 protein YfcK 0.50 HP15_2055 2-isopropylmalate synthase low > 73
Pantoea sp. MT58 0.16 IAI47_06175 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.52 IAI47_10235 2-isopropylmalate synthase low > 76
Pseudomonas fluorescens SBW25 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.65 PFLU_RS24765 2-isopropylmalate synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.65 PFLU_RS24765 2-isopropylmalate synthase low > 109
Rahnella sp. WP5 0.15 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.55 EX31_RS24130 2-isopropylmalate synthase low > 89
Variovorax sp. SCN45 0.14 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.61 GFF1164 2-isopropylmalate synthase (EC 2.3.3.13) low > 127
Castellaniella sp019104865 MT123 0.13 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.69 ABCV34_RS12420 2-isopropylmalate synthase low > 48
Variovorax sp. OAS795 0.12 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.61 ABID97_RS14905 2-isopropylmalate synthase low > 91
Acinetobacter radioresistens SK82 0.09 MPMX26_02642 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.58 MPMX26_00404 2-isopropylmalate synthase low > 36

Not shown: 28 genomes with orthologs for HSERO_RS23825 only; 12 genomes with orthologs for HSERO_RS17185 only