Conservation of cofitness between HSERO_RS00720 and HSERO_RS16360 in Herbaspirillum seropedicae SmR1

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS00720 peroxidase 1.0 HSERO_RS16360 DNA mismatch repair protein MutS 0.31 7
Paraburkholderia bryophila 376MFSha3.1 0.83 H281DRAFT_04736 Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) 0.59 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Paraburkholderia graminis OAS925 0.83 ABIE53_000898 alkyl hydroperoxide reductase subunit AhpC 0.57 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS26185 peroxiredoxin 0.56 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Burkholderia phytofirmans PsJN 0.82 BPHYT_RS03775 peroxidase 0.57 BPHYT_RS12475 DNA mismatch repair protein MutS low > 109
Ralstonia sp. UNC404CL21Col 0.79 ABZR87_RS09090 peroxiredoxin 0.58 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum PSI07 0.79 RPSI07_RS20210 peroxiredoxin 0.59 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS03800 peroxiredoxin 0.58 RS_RS05735 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum UW163 0.79 UW163_RS00550 peroxiredoxin 0.57 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS13015 peroxiredoxin 0.57 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Pseudomonas putida KT2440 0.77 PP_0235 Peroxidase 0.46 PP_1626 DNA mismatch repair protein MutS low > 96
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4501 Alkyl hydroperoxide reductase subunit C-like protein 0.47 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_13095 peroxidase 0.47 AO356_05875 DNA mismatch repair protein MutS low > 104
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS15405 peroxidase 0.57 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Pseudomonas simiae WCS417 0.77 PS417_27180 peroxidase 0.47 PS417_05680 DNA mismatch repair protein MutS low > 88
Pseudomonas sp. RS175 0.76 PFR28_04306 Peroxiredoxin 0.46 PFR28_00429 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS28845 peroxiredoxin 0.47 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25 0.76 PFLU_RS28845 peroxiredoxin 0.47 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_4877 1-Cys peroxiredoxin 0.46 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_4877 1-Cys peroxiredoxin 0.46 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas stutzeri RCH2 0.76 Psest_4057 Peroxiredoxin 0.47 Psest_2875 DNA mismatch repair protein MutS low > 67
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_917 Alkyl hydroperoxide reductase subunit C-like protein 0.46 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_08675 peroxidase 0.46 AO353_16625 DNA mismatch repair protein MutS low > 101
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2246 Alkyl hydroperoxide reductase subunit C-like protein 0.46 Pf1N1B4_3117 DNA mismatch repair protein MutS low > 87
Pseudomonas sp. S08-1 0.75 OH686_11585 Alkyl hydroperoxide reductase subunit C-like protein 0.47 OH686_18195 DNA mismatch repair protein MutS low > 80
Marinobacter adhaerens HP15 0.74 HP15_3906 protein containing alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen / peroxiredoxin, C-terminal 0.47 HP15_1047 DNA mismatch repair protein MutS low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.74 GFF5091 Alkyl hydroperoxide reductase subunit C-like protein 0.48 GFF3599 DNA mismatch repair protein MutS — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS07025 peroxiredoxin 0.49 ABCV34_RS00270 DNA mismatch repair protein MutS low > 48
Acinetobacter radioresistens SK82 0.72 MPMX26_02606 Peroxiredoxin 0.42 MPMX26_01954 DNA mismatch repair protein MutS low > 36
Variovorax sp. OAS795 0.72 ABID97_RS15560 peroxiredoxin 0.45 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Variovorax sp. SCN45 0.72 GFF1285 Alkyl hydroperoxide reductase subunit C-like protein 0.45 GFF6634 DNA mismatch repair protein MutS low > 127
Synechococcus elongatus PCC 7942 0.70 Synpcc7942_2449 1-cys prx 1-Cys peroxiredoxin 0.28 Synpcc7942_2247 mutS DNA mismatch repair protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.70 CA265_RS06260 peroxidase 0.32 CA265_RS08220 DNA mismatch repair protein MutS low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.69 Echvi_2918 Peroxiredoxin 0.31 Echvi_0960 DNA mismatch repair protein MutS low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.67 ABZR88_RS15335 peroxiredoxin 0.32 ABZR88_RS10580 DNA mismatch repair protein MutS low > 71
Rhodopseudomonas palustris CGA009 0.64 TX73_012635 peroxiredoxin 0.29 TX73_002655 DNA mismatch repair protein MutS low > 86
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_01505 peroxiredoxin 0.44 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Agrobacterium fabrum C58 0.53 Atu1480 hypothetical protein 0.29 Atu0345 DNA mismatch repair protein, MutS family low > 89
Sinorhizobium meliloti 1021 0.53 SM_b20964 Ahp/CTSA family anti-oxidant protein 0.28 SMc01125 DNA mismatch repair protein MutS low > 103
Rhizobium sp. OAE497 0.52 ABIE40_RS15050 peroxiredoxin 0.29 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Phaeobacter inhibens DSM 17395 0.47 PGA1_c33020 peroxiredoxin 0.30 PGA1_c35000 DNA mismatch repair protein MutS low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS11530 peroxiredoxin 0.25 A4249_RS12110 DNA mismatch repair protein MutS low > 48

Not shown: 2 genomes with orthologs for HSERO_RS00720 only; 58 genomes with orthologs for HSERO_RS16360 only