Conservation of cofitness between HSERO_RS17745 and HSERO_RS14950 in Herbaspirillum seropedicae SmR1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS17745 hypothetical protein 1.0 HSERO_RS14950 purine-binding chemotaxis protein 0.32 14
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS03535 ATP-binding protein 0.64 RALBFv3_RS17395 chemotaxis protein CheW low > 76
Ralstonia solanacearum UW163 0.63 UW163_RS10135 ATP-binding protein 0.64 UW163_RS21755 chemotaxis protein CheW — —
Ralstonia solanacearum GMI1000 0.62 RS_RS10985 ATP-binding protein 0.64 RS_RS23915 chemotaxis protein CheW low > 80
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS15400 helicase HerA-like C-terminal domain-containing protein 0.65 ABZR87_RS17965 chemotaxis protein CheW low > 80
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS04740 ATP-binding protein 0.67 RR42_RS35800 chemotaxis protein CheW low > 128
Variovorax sp. SCN45 0.58 GFF318 Uncharacterized protein YjgR 0.76 GFF5724 Positive regulator of CheA protein activity (CheW) — —
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13690 DUF853 domain-containing protein 0.64 RPSI07_RS06250 chemotaxis protein CheW low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF4522 ATPase component BioM of energizing module of biotin ECF transporter 0.55 GFF2450 Positive regulator of CheA protein activity (CheW) low > 90
Dechlorosoma suillum PS 0.56 Dsui_0490 putative ATPase 0.60 Dsui_1709 chemotaxis signal transduction protein low > 51
Castellaniella sp019104865 MT123 0.55 ABCV34_RS06665 helicase HerA-like C-terminal domain-containing protein 0.49 ABCV34_RS05830 chemotaxis protein CheW low > 48
Acidovorax sp. GW101-3H11 0.55 Ac3H11_2424 ATPase component BioM of energizing module of biotin ECF transporter 0.57 Ac3H11_1422 Positive regulator of CheA protein activity (CheW) low > 79
Rahnella sp. WP5 0.52 EX31_RS04655 DUF853 domain-containing protein 0.59 EX31_RS11400 chemotaxis protein CheW low > 89
Escherichia coli ECOR38 0.52 HEPCGN_09965 yjgR Uncharacterized protein YjgR 0.60 HEPCGN_04545 cheW chemotaxis protein CheW low > 87
Escherichia coli ECRC62 0.52 BNILDI_07475 yjgR Uncharacterized protein YjgR 0.60 BNILDI_15355 cheW chemotaxis protein CheW low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03773 hypothetical protein 0.60 OHPLBJKB_01841 Chemotaxis protein CheW low > 73
Escherichia coli BL21 0.51 ECD_04129 DUF853 family protein with NTPase fold 0.60 ECD_01858 purine-binding chemotaxis protein — —
Escherichia coli BW25113 0.51 b4263 yjgR predicted ATPase (NCBI) 0.60 b1887 cheW purine-binding chemotaxis protein (NCBI) low > 76
Escherichia coli ECOR27 0.51 NOLOHH_04040 yjgR Uncharacterized protein YjgR 0.60 NOLOHH_16565 cheW chemotaxis protein CheW low > 75
Escherichia coli ECRC100 0.51 OKFHMN_11775 yjgR Uncharacterized protein YjgR 0.60 OKFHMN_26125 cheW chemotaxis protein CheW low > 80
Escherichia coli ECRC101 0.51 MCAODC_02280 yjgR Uncharacterized protein YjgR 0.60 MCAODC_19280 cheW chemotaxis protein CheW low > 87
Escherichia coli ECRC98 0.51 JDDGAC_15415 yjgR Uncharacterized protein YjgR 0.60 JDDGAC_00700 cheW chemotaxis protein CheW low > 86
Escherichia coli ECRC102 0.51 NIAGMN_09625 yjgR Uncharacterized protein YjgR 0.60 NIAGMN_01935 cheW chemotaxis protein CheW — —
Escherichia coli ECRC99 0.51 KEDOAH_16380 yjgR Uncharacterized protein YjgR 0.60 KEDOAH_01980 cheW chemotaxis protein CheW — —
Escherichia coli Nissle 1917 0.51 ECOLIN_RS24710 helicase HerA-like C-terminal domain-containing protein 0.60 ECOLIN_RS10775 chemotaxis protein CheW low > 55
Escherichia fergusonii Becca 0.51 EFB2_04272 hypothetical protein 0.60 EFB2_02056 Chemotaxis protein CheW low > 86
Serratia liquefaciens MT49 0.51 IAI46_23600 DUF853 family protein 0.62 IAI46_16035 chemotaxis protein CheW low > 86
Enterobacter asburiae PDN3 0.50 EX28DRAFT_3273 Predicted ATPase 0.61 EX28DRAFT_0663 Chemotaxis signal transduction protein low > 76
Pantoea sp. MT58 0.50 IAI47_16720 DUF853 domain-containing protein 0.60 IAI47_08305 chemotaxis protein CheW low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_04124 hypothetical protein 0.60 MPMX20_02797 Chemotaxis protein CheW low > 85
Sinorhizobium meliloti 1021 0.48 SMc00100 hypothetical protein 0.35 SMc03008 chemotaxis protein low > 103
Rhodopseudomonas palustris CGA009 0.48 TX73_009475 DUF853 family protein 0.26 TX73_000720 chemotaxis protein CheW low > 86
Rhizobium sp. OAE497 0.48 ABIE40_RS22125 helicase HerA-like C-terminal domain-containing protein 0.35 ABIE40_RS02880 chemotaxis protein CheW low > 107
Agrobacterium fabrum C58 0.48 Atu0860 hypothetical protein 0.31 Atu2075 chemotaxis protein low > 89
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS08070 helicase HerA-like domain-containing protein 0.37 ABZR86_RS22225 chemotaxis protein CheW low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS14745 DUF853 family protein 0.34 A4249_RS15570 chemotaxis protein CheW low > 48
Phaeobacter inhibens DSM 17395 0.45 PGA1_c15960 Predicted ATPase 0.27 PGA1_262p02110 putative chemotaxis protein CheW low > 62
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00088 HerA helicase-related ATPase 0.32 CCNA_00443 chemotaxis protein cheW low > 67
Caulobacter crescentus NA1000 0.44 CCNA_00088 HerA helicase-related ATPase 0.32 CCNA_00443 chemotaxis protein cheW low > 66
Lysobacter sp. OAE881 0.44 ABIE51_RS08185 helicase HerA-like domain-containing protein 0.54 ABIE51_RS16920 chemotaxis protein CheW low > 62
Shewanella sp. ANA-3 0.43 Shewana3_0459 protein of unknown function DUF853, NPT hydrolase putative (RefSeq) 0.57 Shewana3_2217 CheW protein (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1948.1 ATPase component BioM of energizing module of biotin ECF transporter 0.56 Xcc-8004.2882.1 Positive regulator of CheA protein activity (CheW) low > 74
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_04775 herA ATP-binding protein 0.40 OKGIIK_02895 Chemotaxis protein CheW low > 52
Shewanella oneidensis MR-1 0.42 SO0459 conserved hypothetical protein (NCBI ptt file) 0.57 SO2122 cheW-1 purine-binding chemotaxis protein CheW (NCBI ptt file) low > 76
Pseudomonas sp. RS175 0.38 PFR28_03433 hypothetical protein 0.30 PFR28_00861 Chemotaxis protein CheW low > 88
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1831 ATPase component BioM of energizing module of biotin ECF transporter 0.29 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) low > 87
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_659 ATPase component BioM of energizing module of biotin ECF transporter 0.30 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) — —
Pseudomonas sp. S08-1 0.37 OH686_18310 Uncharacterized protein YjgR 0.29 OH686_02685 Positive regulator of CheA protein activity (CheW) low > 80

Not shown: 10 genomes with orthologs for HSERO_RS17745 only; 24 genomes with orthologs for HSERO_RS14950 only