Conservation of cofitness between HSERO_RS05425 and HSERO_RS09445 in Herbaspirillum seropedicae SmR1

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05425 decarboxylase 1.0 HSERO_RS09445 iron deficiency-induced protein A 0.31 17
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS22440 DNA-binding protein 0.15 BPHYT_RS23970 iron ABC transporter substrate-binding protein low > 109
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS21340 DNA-binding protein 0.60 RR42_RS04335 iron deficiency-induced protein A low > 128
Castellaniella sp019104865 MT123 0.45 ABCV34_RS01775 PLP-dependent aminotransferase family protein 0.34 ABCV34_RS03555 Fe(3+) ABC transporter substrate-binding protein
Pectobacterium carotovorum WPP14 0.44 HER17_RS09875 PLP-dependent aminotransferase family protein 0.32 HER17_RS14365 Fe(3+) ABC transporter substrate-binding protein low > 75
Dickeya dianthicola ME23 0.44 DZA65_RS12410 PLP-dependent aminotransferase family protein 0.13 DZA65_RS09025 iron ABC transporter substrate-binding protein low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS11865 PLP-dependent aminotransferase family protein 0.13 HGI48_RS08730 iron ABC transporter substrate-binding protein low > 71
Dickeya dadantii 3937 0.43 DDA3937_RS11835 PLP-dependent aminotransferase family protein 0.13 DDA3937_RS08590 iron ABC transporter substrate-binding protein low > 74
Serratia liquefaciens MT49 0.42 IAI46_22170 PLP-dependent aminotransferase family protein 0.14 IAI46_13015 iron ABC transporter substrate-binding protein low > 86
Klebsiella michiganensis M5al 0.41 BWI76_RS26380 decarboxylase 0.13 BWI76_RS10470 iron ABC transporter substrate-binding protein low > 92
Rahnella sp. WP5 0.41 EX31_RS00090 PLP-dependent aminotransferase family protein 0.31 EX31_RS17570 extracellular solute-binding protein low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2040 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.60 GFF3827 Ferric iron ABC transporter, iron-binding protein 0.54 45
Azospirillum sp. SherDot2 0.34 MPMX19_03847 HTH-type transcriptional regulatory protein GabR 0.43 MPMX19_01386 Iron deficiency-induced protein A low > 112
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_3163 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.32 PfGW456L13_900 Ferric iron ABC transporter, iron-binding protein low > 87
Variovorax sp. SCN45 0.31 GFF1662 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.31 GFF6762 Ferric iron ABC transporter, iron-binding protein low > 127
Variovorax sp. OAS795 0.30 ABID97_RS21960 PLP-dependent aminotransferase family protein 0.31 ABID97_RS21255 Fe(3+) ABC transporter substrate-binding protein low > 91
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_20995 transcriptional regulator 0.32 AO353_08745 iron ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_5999 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.31 Pf1N1B4_2232 Ferric iron ABC transporter, iron-binding protein low > 87
Rhodopseudomonas palustris CGA009 0.30 TX73_007155 PLP-dependent aminotransferase family protein 0.32 TX73_021525 Fe(3+) ABC transporter substrate-binding protein low > 86
Enterobacter asburiae PDN3 0.29 EX28DRAFT_2501 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 0.15 EX28DRAFT_2437 ABC-type Fe3+ transport system, periplasmic component low > 76
Pseudomonas sp. S08-1 0.29 OH686_13310 Transcriptional regulator, GntR family domain / Aspartate aminotransferase 0.32 OH686_11185 Ferric iron ABC transporter, iron-binding protein low > 80
Enterobacter sp. TBS_079 0.29 MPMX20_01059 HTH-type transcriptional regulatory protein GabR 0.14 MPMX20_01119 Fe(3+)-binding periplasmic protein low > 85
Acidovorax sp. GW101-3H11 0.29 Ac3H11_1092 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.65 Ac3H11_2605 Ferric iron ABC transporter, iron-binding protein low > 79
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29850 PLP-dependent aminotransferase family protein 0.32 PFLU_RS28925 extracellular solute-binding protein low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29850 PLP-dependent aminotransferase family protein 0.32 PFLU_RS28925 extracellular solute-binding protein low > 109
Dinoroseobacter shibae DFL-12 0.29 Dshi_0609 transcriptional regulator, GntR family with aminotransferase domain (RefSeq) 0.41 Dshi_2021 extracellular solute-binding protein family 1 (RefSeq)
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_5056 transcriptional regulator, GntR family 0.30 Psyr_0244 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_5056 transcriptional regulator, GntR family 0.30 Psyr_0244 extracellular solute-binding protein, family 1 low > 86
Pseudomonas simiae WCS417 0.28 PS417_12985 DNA-binding protein 0.31 PS417_27265 iron ABC transporter substrate-binding protein low > 88
Pseudomonas putida KT2440 0.28 PP_5342 Transcriptional regulator, GntR family 0.33 PP_5196 putative iron(III)|iron ABC transporter, periplasmic iron-binding protein low > 96
Rhodospirillum rubrum S1H 0.28 Rru_A1143 regulatory protein GntR (NCBI) 0.31 Rru_A0769 extracellular solute-binding protein, family 1 (NCBI) low > 58
Azospirillum brasilense Sp245 0.28 AZOBR_RS22530 transcriptional regulator 0.48 AZOBR_RS03165 iron deficiency-induced protein A low > 97
Marinobacter adhaerens HP15 0.27 HP15_2761 transcriptional regulator, GntR family with aminotransferase domain protein 0.44 HP15_3843 iron(III) ABC transporter, periplasmic iron-compound-binding protein low > 73
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_12070 GntR family transcriptional regulator 0.32 AO356_13025 iron ABC transporter substrate-binding protein low > 104
Phaeobacter inhibens DSM 17395 0.27 PGA1_262p01530 transcriptional regulator, GntR family 0.41 PGA1_c32510 iron uptake protein FutA low > 62
Dechlorosoma suillum PS 0.27 Dsui_2252 transcriptional regulator with HTH domain and aminotransferase domain 0.59 Dsui_2928 ABC-type Fe3+ transport system, periplasmic component low > 51
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4288 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 0.32 Pf6N2E2_4483 Ferric iron ABC transporter, iron-binding protein low > 103
Pseudomonas sp. RS175 0.26 PFR28_04508 HTH-type transcriptional regulatory protein GabR 0.32 PFR28_04318 putative binding protein component of ABC iron transporter low > 88
Rhizobium sp. OAE497 0.24 ABIE40_RS04930 PLP-dependent aminotransferase family protein 0.32 ABIE40_RS21710 extracellular solute-binding protein low > 107
Sinorhizobium meliloti 1021 0.15 SM_b21525 transcriptional regulator 0.35 SMc00784 iron binding protein low > 103

Not shown: 26 genomes with orthologs for HSERO_RS05425 only; 11 genomes with orthologs for HSERO_RS09445 only