| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS00910 | | peptidase | 1.0 | HSERO_RS08270 | | amino acid ABC transporter substrate-binding protein | 0.43 | 11 |
| Cupriavidus basilensis FW507-4G11 | 0.83 | RR42_RS01060 | | peptidase | 0.85 | RR42_RS14425 | | leucine ABC transporter substrate-binding protein | low | > 128 |
| Variovorax sp. OAS795 | 0.79 | ABID97_RS06180 | | ATP-dependent protease subunit HslV | 0.30 | ABID97_RS27585 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.79 | ABCV34_RS13415 | | ATP-dependent protease subunit HslV | 0.65 | ABCV34_RS03585 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 48 |
| Marinobacter adhaerens HP15 | 0.70 | HP15_466 | | ATP-dependent protease peptidase subunit | 0.57 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | low | > 73 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS00920 | | ATP-dependent protease subunit HslV | 0.54 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 74 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS21500 | | ATP-dependent protease subunit HslV | 0.53 | DZA65_RS21740 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 75 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_24570 | | ATP-dependent protease subunit HslV | 0.50 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 86 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS20455 | | ATP-dependent protease subunit HslV | 0.53 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS00855 | | ATP-dependent protease subunit HslV | 0.54 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 75 |
| Rahnella sp. WP5 | 0.67 | EX31_RS14240 | | ATP-dependent protease subunit HslV | 0.52 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS19670 | hslV | ATP-dependent protease subunit HslV | 0.51 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 74 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_11490 | hslV | ATP-dependent protease subunit HslV | 0.52 | NIAGMN_14490 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | — | — |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_14425 | hslV | ATP-dependent protease subunit HslV | 0.52 | KEDOAH_11420 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | — | — |
| Escherichia coli BW25113 | 0.66 | b3932 | hslV | ATP-dependent protease peptidase subunit (NCBI) | 0.52 | b3460 | livJ | leucine/isoleucine/valine transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_12380 | hslV | ATP-dependent protease subunit HslV | 0.52 | HEPCGN_15550 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | low | > 87 |
| Escherichia fergusonii Becca | 0.66 | EFB2_04686 | | ATP-dependent protease subunit HslV | 0.53 | EFB2_00364 | | Leucine-specific-binding protein | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_04119 | | ATP-dependent protease subunit HslV | 0.53 | OHPLBJKB_00243 | | Leu/Ile/Val-binding protein | low | > 73 |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_13735 | hslV | ATP-dependent protease subunit HslV | 0.52 | OKFHMN_16720 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | low | > 80 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_04235 | hslV | ATP-dependent protease subunit HslV | 0.52 | MCAODC_07250 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | low | > 87 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_05880 | hslV | ATP-dependent protease subunit HslV | 0.52 | NOLOHH_08525 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | low | > 75 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_17360 | hslV | ATP-dependent protease subunit HslV | 0.52 | JDDGAC_20350 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | low | > 86 |
| Escherichia coli BL21 | 0.66 | ECD_03817 | | peptidase component of the HslUV protease | 0.53 | ECD_03309 | | branched-chain amino acid ABC transporter periplasmic binding protein | low | > 61 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS22640 | | ATP-dependent protease subunit HslV | 0.52 | ECOLIN_RS19790 | | branched chain amino acid ABC transporter substrate-binding protein LivJ | low | > 55 |
| Pantoea sp. MT58 | 0.66 | IAI47_00850 | | ATP-dependent protease subunit HslV | 0.53 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 76 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_05650 | hslV | ATP-dependent protease subunit HslV | 0.52 | BNILDI_02990 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | low | > 75 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_04537 | | ATP-dependent protease subunit HslV | 0.52 | MPMX20_04334 | | Leucine-specific-binding protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_4405 | | ATP-dependent protease HslVU, peptidase subunit | 0.52 | EX28DRAFT_4293 | | ABC-type branched-chain amino acid transport systems, periplasmic component | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_12430 | | ATP-dependent protease subunit HslV | 0.60 | AO353_17125 | | leucine ABC transporter substrate-binding protein | — | — |
| Pseudomonas simiae WCS417 | 0.65 | PS417_01920 | | ATP-dependent protease subunit HslV | 0.59 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | low | > 88 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS00755 | | ATP-dependent protease subunit HslV | 0.53 | BWI76_RS26350 | | branched chain amino acid ABC transporter substrate-binding protein | low | > 92 |
| Pseudomonas fluorescens SBW25 | 0.65 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.65 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_1552 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.60 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.62 | DvMF_0485 | | ATP-dependent protease peptidase subunit (RefSeq) | 0.30 | DvMF_2607 | | Extracellular ligand-binding receptor (RefSeq) | low | > 51 |
| Pseudomonas putida KT2440 | 0.61 | PP_5000 | | peptidase component of the ATP-dependent HslVU protease | 0.58 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | low | > 96 |
| Pseudomonas sp. S08-1 | 0.61 | OH686_10095 | | ATP-dependent protease HslVU, peptidase subunit | 0.60 | OH686_04605 | | Branched-chain amino acid ABC transporter, substrate-binding protein LivJ | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | 0.60 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.61 | SMc02575 | | ATP-dependent protease peptidase subunit | 0.41 | SMc00078 | | Leu/Ile/Val-binding protein | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | 0.60 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Rhodopseudomonas palustris CGA009 | 0.60 | TX73_001600 | | ATP-dependent protease subunit HslV | 0.39 | TX73_019730 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 86 |
| Bosea sp. OAE506 | 0.60 | ABIE41_RS04430 | | ATP-dependent protease subunit HslV | 0.42 | ABIE41_RS13610 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 77 |
| Rhodospirillum rubrum S1H | 0.60 | Rru_A3599 | | 20S proteasome, A and B subunits (NCBI) | 0.40 | Rru_A1746 | | Extracellular ligand-binding receptor (NCBI) | low | > 58 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_04999 | | ATP-dependent protease subunit HslV | 0.59 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_3936 | | ATP-dependent protease HslVU, peptidase subunit | 0.61 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | low | > 67 |
| Azospirillum brasilense Sp245 | 0.59 | AZOBR_RS01655 | | peptidase | 0.39 | AZOBR_RS08260 | | L-proline and D-alanine ABC transporter, substrate-binding component (from data) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.59 | DVU1577 | hslV | ATP-dependent protease hslV (TIGR) | 0.29 | DVU0547 | | high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) | low | > 55 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_289 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.61 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_09455 | | ATP-dependent protease subunit HslV | 0.60 | AO356_05320 | | leucine ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_3769 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.60 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.57 | AMB_RS22950 | | HslU--HslV peptidase proteolytic subunit | 0.40 | AMB_RS15010 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 64 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.56 | GFF2314 | | ATP-dependent protease HslV (EC 3.4.25.-) | 0.52 | GFF548 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 78 |
| Agrobacterium fabrum C58 | 0.56 | Atu0044 | | heat shock protein hslV | 0.38 | Atu2422 | | ABC transporter, substrate binding protein (amino acid) | low | > 89 |
| Rhizobium sp. OAE497 | 0.55 | ABIE40_RS19465 | | ATP-dependent protease subunit HslV | 0.39 | ABIE40_RS14690 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 107 |
| Azospirillum sp. SherDot2 | 0.54 | MPMX19_02548 | | ATP-dependent protease subunit HslV | 0.41 | MPMX19_04840 | | Leu/Ile/Val-binding protein | low | > 112 |
Not shown: 33 genomes with orthologs for HSERO_RS00910 only; 1 genomes with orthologs for HSERO_RS08270 only