Conservation of cofitness between HSERO_RS06265 and HSERO_RS01270 in Herbaspirillum seropedicae SmR1

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS06265 3-hydroxybutyrate dehydrogenase 1.0 HSERO_RS01270 enoyl-CoA hydratase 0.25 6
Variovorax sp. OAS795 0.73 ABID97_RS14375 3-hydroxybutyrate dehydrogenase 0.55 ABID97_RS05900 enoyl-CoA hydratase low > 91
Variovorax sp. SCN45 0.73 GFF1032 Oxidoreductase, short-chain dehydrogenase/reductase family 0.52 GFF4601 Enoyl-CoA hydratase (EC 4.2.1.17) low > 127
Marinobacter adhaerens HP15 0.67 HP15_3798 3-hydroxybutyrate dehydrogenase 0.45 HP15_1141 enoyl-CoA hydratase/isomerase low > 73
Paraburkholderia graminis OAS925 0.67 ABIE53_004793 3-hydroxybutyrate dehydrogenase 0.63 ABIE53_000786 enoyl-CoA hydratase/carnithine racemase low > 113
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS09070 3-hydroxybutyrate dehydrogenase 0.64 QEN71_RS02075 enoyl-CoA hydratase low > 153
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS19645 3-hydroxybutyrate dehydrogenase 0.63 ABZR87_RS07495 enoyl-CoA hydratase low > 80
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS01235 3-hydroxybutyrate dehydrogenase 0.60 RR42_RS02525 enoyl-CoA hydratase low > 128
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS11930 3-hydroxybutyrate dehydrogenase 0.61 BPHYT_RS03235 enoyl-CoA hydratase low > 109
Ralstonia solanacearum GMI1000 0.63 RS_RS22245 3-hydroxybutyrate dehydrogenase 0.62 RS_RS02360 enoyl-CoA hydratase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04976 3-hydroxybutyrate dehydrogenase 0.63 H281DRAFT_04627 Enoyl-CoA hydratase low > 103
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS18705 3-hydroxybutyrate dehydrogenase 0.63 RALBFv3_RS11530 enoyl-CoA hydratase low > 76
Ralstonia solanacearum UW163 0.63 UW163_RS20425 3-hydroxybutyrate dehydrogenase 0.63 UW163_RS02055 enoyl-CoA hydratase — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS04890 3-hydroxybutyrate dehydrogenase 0.63 RPSI07_RS21680 enoyl-CoA hydratase low > 81
Bosea sp. OAE506 0.37 ABIE41_RS20260 3-hydroxybutyrate dehydrogenase 0.35 ABIE41_RS07775 enoyl-CoA hydratase-related protein low > 77
Alteromonas macleodii MIT1002 0.37 MIT1002_01448 D-beta-hydroxybutyrate dehydrogenase 0.36 MIT1002_02260 2,3-dehydroadipyl-CoA hydratase low > 70
Sinorhizobium meliloti 1021 0.36 SM_b21010 D-beta-hydroxybutyrate dehydrogenase 0.30 SMc00976 enoyl-CoA hydratase low > 103
Agrobacterium fabrum C58 0.35 Atu2308 d-beta-hydroxybutyrate dehydrogenase 0.32 Atu0733 enoyl-CoA hydratase/isomerase low > 89
Rhodopseudomonas palustris CGA009 0.33 TX73_021805 3-hydroxybutyrate dehydrogenase 0.37 TX73_004930 crotonase/enoyl-CoA hydratase family protein low > 86
Rhizobium sp. OAE497 0.33 ABIE40_RS13735 3-hydroxybutyrate dehydrogenase 0.28 ABIE40_RS03860 crotonase/enoyl-CoA hydratase family protein low > 107
Caulobacter crescentus NA1000 0.33 CCNA_03495 D-beta-hydroxybutyrate dehydrogenase 0.36 CCNA_00401 enoyl-CoA hydratase low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_03495 D-beta-hydroxybutyrate dehydrogenase 0.36 CCNA_00401 enoyl-CoA hydratase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS06090 3-hydroxybutyrate dehydrogenase 0.39 A4249_RS02670 enoyl-CoA hydratase low > 48
Castellaniella sp019104865 MT123 0.32 ABCV34_RS01165 3-hydroxybutyrate dehydrogenase 0.34 ABCV34_RS11055 enoyl-CoA hydratase-related protein low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF4927 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.54 GFF418 Enoyl-CoA hydratase (EC 4.2.1.17) low > 90
Magnetospirillum magneticum AMB-1 0.31 AMB_RS13470 3-hydroxybutyrate dehydrogenase 0.34 AMB_RS20905 enoyl-CoA hydratase/carnithine racemase low > 64
Acidovorax sp. GW101-3H11 0.30 Ac3H11_360 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.49 Ac3H11_1919 Enoyl-CoA hydratase (EC 4.2.1.17) low > 79
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_2771 3-hydroxybutyrate dehydrogenase 0.42 Ga0059261_4222 Enoyl-CoA hydratase/carnithine racemase low > 68
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_21770 3-hydroxybutyrate dehydrogenase 0.37 AO353_03780 enoyl-CoA hydratase low > 101
Pseudomonas sp. S08-1 0.29 OH686_00815 3-hydroxybutyrate dehydrogenase 0.39 OH686_18795 Enoyl-CoA hydratase low > 80
Pseudomonas simiae WCS417 0.29 PS417_12150 3-hydroxybutyrate dehydrogenase 0.36 PS417_22625 enoyl-CoA hydratase — —
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_5633 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.38 Pf1N1B4_679 Enoyl-CoA hydratase (EC 4.2.1.17) — —
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2873 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.41 PfGW456L13_1812 Enoyl-CoA hydratase (EC 4.2.1.17) low > 87
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_00420 3-hydroxybutyrate dehydrogenase 0.42 AO356_17825 enoyl-CoA hydratase low > 104
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2041 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 0.43 Pf6N2E2_5493 Enoyl-CoA hydratase (EC 4.2.1.17) low > 103
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS12840 3-hydroxybutyrate dehydrogenase 0.37 PFLU_RS24260 enoyl-CoA hydratase low > 109
Pseudomonas fluorescens SBW25 0.28 PFLU_RS12840 3-hydroxybutyrate dehydrogenase 0.37 PFLU_RS24260 enoyl-CoA hydratase low > 109
Pseudomonas putida KT2440 0.28 PP_3073 3-hydroxybutyrate dehydrogenase 0.35 PP_3732 Enoyl-CoA hydratase/isomerase family protein low > 96
Shewanella amazonensis SB2B 0.27 Sama_0517 D-beta-hydroxybutyrate dehydrogenase (RefSeq) 0.42 Sama_3052 enoyl-CoA hydratase/isomerase family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.27 Shewana3_3466 short-chain dehydrogenase/reductase SDR (RefSeq) 0.46 Shewana3_0721 enoyl-CoA hydratase (RefSeq) low > 73

Not shown: 26 genomes with orthologs for HSERO_RS06265 only; 4 genomes with orthologs for HSERO_RS01270 only