Conservation of cofitness between HSERO_RS13630 and HSERO_RS00825 in Herbaspirillum seropedicae SmR1

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS13630 aldo-keto reductase 1.0 HSERO_RS00825 protease 0.31 7
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_17050 aldo/keto reductase 0.22 AO356_09775 peptidase M23 low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_5334 Oxidoreductase, aldo/keto reductase family 0.23 Pf6N2E2_3834 Lipoprotein NlpD low > 103
Pseudomonas sp. RS175 0.62 PFR28_03609 Protein tas 0.23 PFR28_04937 Murein hydrolase activator EnvC low > 88
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_2296 Aldo/keto reductase 0.22 Psyr_4886 Peptidase M23B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_2296 Aldo/keto reductase 0.22 Psyr_4886 Peptidase M23B low > 86
Pseudomonas stutzeri RCH2 0.62 Psest_3282 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 0.20 Psest_0161 Membrane-bound metallopeptidase low > 67
Pseudomonas sp. S08-1 0.61 OH686_08405 Tas protein, an NADP(H)-dependent aldo-keto reductase 0.19 OH686_14650 Murein hydrolase activator EnvC low > 80
Marinobacter adhaerens HP15 0.61 HP15_740 oxidoreductase Tas, aldo/keto reductase family protein 0.18 HP15_3006 peptidase M23B low > 73
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_15230 aldo/keto reductase 0.23 AO353_12110 peptidase M23 low > 101
Pseudomonas simiae WCS417 0.61 PS417_04140 aldo/keto reductase 0.23 PS417_01600 peptidase M23 low > 88
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_1631 Oxidoreductase, aldo/keto reductase family 0.22 PfGW456L13_354 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP low > 87
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_965 Oxidoreductase, aldo/keto reductase family 0.23 Pf1N1B4_1618 Lipoprotein NlpD
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS04180 NADP(H)-dependent aldo-keto reductase 0.23 PFLU_RS01650 murein hydrolase activator EnvC low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS04180 NADP(H)-dependent aldo-keto reductase 0.23 PFLU_RS01650 murein hydrolase activator EnvC low > 109
Pseudomonas putida KT2440 0.61 PP_1314 putative NAD(P)-linked reductase 0.23 PP_5057 Peptidase, M23/M37 family low > 96
Escherichia fergusonii Becca 0.59 EFB2_01049 Protein tas 0.15 EFB2_00197 Murein hydrolase activator EnvC low > 86
Escherichia coli BL21 0.59 ECD_02682 putative NADP(H)-dependent aldo-keto reductase 0.15 ECD_03471 activator of AmiB,C murein hydrolases, septal ring factor
Rahnella sp. WP5 0.59 EX31_RS13220 NADP(H)-dependent aldo-keto reductase 0.16 EX31_RS14365 murein hydrolase activator EnvC low > 89
Escherichia coli Nissle 1917 0.59 ECOLIN_RS15910 NADP(H)-dependent aldo-keto reductase 0.15 ECOLIN_RS20620 murein hydrolase activator EnvC low > 55
Escherichia coli BW25113 0.59 b2834 tas predicted oxidoreductase, NADP(H)-dependent aldo-keto reductase (NCBI) 0.15 b3613 yibP putative membrane protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_00895 Protein tas 0.15 OHPLBJKB_00086 Murein hydrolase activator EnvC low > 73
Escherichia coli ECOR27 0.59 NOLOHH_11860 tas NADP(H)-dependent aldo-keto reductase 0.15 NOLOHH_07610 envC murein hydrolase activator EnvC low > 75
Serratia liquefaciens MT49 0.59 IAI46_20475 NADP(H)-dependent aldo-keto reductase 0.16 IAI46_24715 murein hydrolase activator EnvC low > 86
Escherichia coli ECRC62 0.59 BNILDI_10340 tas NADP(H)-dependent aldo-keto reductase 0.15 BNILDI_03905 envC murein hydrolase activator EnvC low > 75
Dickeya dadantii 3937 0.59 DDA3937_RS04925 NADP(H)-dependent aldo-keto reductase 0.16 DDA3937_RS20420 murein hydrolase activator EnvC 0.49 31
Pantoea sp. MT58 0.59 IAI47_03895 NADP(H)-dependent aldo-keto reductase 0.13 IAI47_00720 murein hydrolase activator EnvC low > 76
Escherichia coli ECRC99 0.59 KEDOAH_08155 tas NADP(H)-dependent aldo-keto reductase 0.15 KEDOAH_12420 envC murein hydrolase activator EnvC
Escherichia coli ECRC102 0.59 NIAGMN_17745 tas NADP(H)-dependent aldo-keto reductase 0.15 NIAGMN_13490 envC murein hydrolase activator EnvC
Escherichia coli ECRC98 0.59 JDDGAC_23640 tas NADP(H)-dependent aldo-keto reductase 0.15 JDDGAC_19355 envC murein hydrolase activator EnvC low > 86
Escherichia coli ECRC101 0.59 MCAODC_10500 tas NADP(H)-dependent aldo-keto reductase 0.15 MCAODC_06240 envC murein hydrolase activator EnvC low > 87
Escherichia coli ECOR38 0.59 HEPCGN_19535 tas NADP(H)-dependent aldo-keto reductase 0.15 HEPCGN_14570 envC murein hydrolase activator EnvC low > 87
Escherichia coli ECRC100 0.59 OKFHMN_19975 tas NADP(H)-dependent aldo-keto reductase 0.15 OKFHMN_15730 envC murein hydrolase activator EnvC low > 80
Dickeya dianthicola ME23 0.59 DZA65_RS05270 NADP(H)-dependent aldo-keto reductase 0.16 DZA65_RS00835 murein hydrolase activator EnvC low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS04935 NADP(H)-dependent aldo-keto reductase 0.17 HGI48_RS00780 murein hydrolase activator EnvC low > 71
Pectobacterium carotovorum WPP14 0.58 HER17_RS16605 NADP(H)-dependent aldo-keto reductase 0.15 HER17_RS20750 murein hydrolase activator EnvC low > 75
Klebsiella michiganensis M5al 0.58 BWI76_RS23305 NADP(H)-dependent aldo-keto reductase 0.16 BWI76_RS27235 murein hydrolase activator EnvC low > 92
Enterobacter sp. TBS_079 0.58 MPMX20_03696 Protein tas 0.16 MPMX20_00120 Murein hydrolase activator EnvC low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2908 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 0.16 EX28DRAFT_3864 Membrane-bound metallopeptidase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF1317 Oxidoreductase, aldo/keto reductase family 0.16 GFF397 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP
Erwinia tracheiphila SCR3 0.56 LU632_RS06080 NADP(H)-dependent aldo-keto reductase 0.15 LU632_RS21895 envC murein hydrolase activator EnvC low > 74
Shewanella loihica PV-4 0.56 Shew_0736 aldo/keto reductase (RefSeq) 0.17 Shew_3807 peptidase M23B (RefSeq) low > 60
Shewanella oneidensis MR-1 0.55 SO0900 oxidoreductase, aldo/keto reductase family (NCBI ptt file) 0.17 SO0048 peptidase, M23/M37 family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.55 Sama_2776 aldo/keto reductase family oxidoreductase (RefSeq) 0.18 Sama_0059 M24/M37 family peptidase (RefSeq) low > 62
Dechlorosoma suillum PS 0.48 Dsui_3371 putative oxidoreductase, aryl-alcohol dehydrogenase like protein 0.28 Dsui_1271 membrane-bound metallopeptidase low > 51
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_16170 pdxI Pyridoxal reductase PdxI or related oxidoreductase, aldo/keto reductase family 0.12 OKGIIK_12915 Peptidase M23 low > 52
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS09920 aldo/keto reductase 0.12 LRK54_RS10955 peptidoglycan DD-metalloendopeptidase family protein low > 59
Rhodanobacter denitrificans MT42 0.24 LRK55_RS09560 aldo/keto reductase 0.12 LRK55_RS10660 peptidoglycan DD-metalloendopeptidase family protein
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.348.1 Oxidoreductase 0.14 Xcc-8004.29.1 Cell wall endopeptidase, family M23/M37 low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_00520 alcohol dehydrogenase 0.07 CA264_14515 peptidase M23 low > 74
Lysobacter sp. OAE881 0.20 ABIE51_RS00630 aldo/keto reductase 0.18 ABIE51_RS19260 peptidoglycan DD-metalloendopeptidase family protein low > 62

Not shown: 25 genomes with orthologs for HSERO_RS13630 only; 4 genomes with orthologs for HSERO_RS00825 only