Conservation of cofitness between HGI48_RS06620 and HGI48_RS10255 in Dickeya dianthicola 67-19

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS06620 galactose-1-epimerase 1.0 HGI48_RS10255 PrkA family serine protein kinase 0.65 12
Dickeya dianthicola ME23 0.98 DZA65_RS06975 galactose-1-epimerase 0.99 DZA65_RS10730 PrkA family serine protein kinase low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS06600 galactose-1-epimerase 0.99 DDA3937_RS10245 PrkA family serine protein kinase low > 74
Pectobacterium carotovorum WPP14 0.67 HER17_RS14770 galactose-1-epimerase 0.97 HER17_RS11150 protein kinase YeaG low > 75
Serratia liquefaciens MT49 0.63 IAI46_06420 galactose-1-epimerase 0.95 IAI46_14375 protein kinase YeaG low > 86
Rahnella sp. WP5 0.58 EX31_RS23565 galactose-1-epimerase 0.95 EX31_RS06260 protein kinase YeaG 0.25 63
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF649 Aldose 1-epimerase (EC 5.1.3.3) 0.95 GFF3473 Serine protein kinase (prkA protein), P-loop containing low > 78
Escherichia coli ECOR27 0.57 NOLOHH_23160 galM galactose-1-epimerase 0.94 NOLOHH_17240 yeaG protein kinase YeaG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02957 Aldose 1-epimerase 0.94 OHPLBJKB_01949 hypothetical protein low > 73
Escherichia coli BW25113 0.57 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) 0.94 b1783 yeaG yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Escherichia coli ECOR38 0.57 HEPCGN_01545 galM galactose-1-epimerase 0.94 HEPCGN_05100 yeaG protein kinase YeaG low > 87
Escherichia coli ECRC62 0.57 BNILDI_21155 galM galactose-1-epimerase 0.94 BNILDI_16025 yeaG protein kinase YeaG low > 75
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04025 galactose-1-epimerase 0.94 ECOLIN_RS09940 protein kinase YeaG low > 55
Escherichia fergusonii Becca 0.57 EFB2_03350 Aldose 1-epimerase 0.94 EFB2_02211 hypothetical protein low > 86
Erwinia tracheiphila SCR3 0.57 LU632_RS15915 galM galactose-1-epimerase 0.94 LU632_RS13010 yeaG PrkA family serine protein kinase low > 74
Escherichia coli ECRC102 0.57 NIAGMN_04780 galM galactose-1-epimerase 0.94 NIAGMN_01355 yeaG protein kinase YeaG — —
Escherichia coli ECRC98 0.57 JDDGAC_10385 galM galactose-1-epimerase 0.94 JDDGAC_01285 yeaG protein kinase YeaG low > 86
Escherichia coli ECRC99 0.57 KEDOAH_21235 galM galactose-1-epimerase 0.94 KEDOAH_01400 yeaG protein kinase YeaG — —
Escherichia coli ECRC100 0.57 OKFHMN_06730 galM galactose-1-epimerase 0.94 OKFHMN_26710 yeaG protein kinase YeaG low > 80
Pantoea sp. MT58 0.57 IAI47_13595 galactose-1-epimerase 0.94 IAI47_08925 protein kinase YeaG low > 76
Escherichia coli ECRC101 0.57 MCAODC_25950 galM galactose-1-epimerase 0.94 MCAODC_18700 yeaG protein kinase YeaG low > 87
Klebsiella michiganensis M5al 0.56 BWI76_RS08610 galactose-1-epimerase 0.95 BWI76_RS11485 serine protein kinase PrkA low > 92
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2239 galactose mutarotase 0.95 EX28DRAFT_1776 putative serine protein kinase, PrkA low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_01383 Aldose 1-epimerase 0.95 MPMX20_01840 hypothetical protein low > 85
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_07995 galactose-1-epimerase 0.85 CSW01_09380 PrkA family serine protein kinase low > 62
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS25885 aldose epimerase family protein 0.74 QEN71_RS07375 PrkA family serine protein kinase low > 153
Shewanella oneidensis MR-1 0.28 SO0693 galM aldose 1-epimerase (NCBI ptt file) 0.86 SO2882 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Shewanella sp. ANA-3 0.28 Shewana3_3579 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.86 Shewana3_1638 putative serine protein kinase, PrkA (RefSeq) low > 73
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS18210 aldose epimerase family protein 0.76 ABZR87_RS14220 PrkA family serine protein kinase low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_09120 galactose-1-epimerase 0.67 CA264_07100 PrkA family serine protein kinase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_03874 aldose 1-epimerase (EC 5.1.3.3) 0.76 H281DRAFT_05232 putative serine protein kinase, PrkA low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_2369 aldose 1-epimerase 0.78 Psyr_4631 PrkA serine kinase low > 86
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS22450 aldose 1-epimerase 0.75 HSERO_RS21690 PrkA family serine protein kinase low > 78
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_2369 aldose 1-epimerase 0.78 Psyr_4631 PrkA serine kinase 0.35 32
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_84 Aldose 1-epimerase (EC 5.1.3.3) 0.77 Pf1N1B4_2523 Serine protein kinase (prkA protein), P-loop containing low > 87
Pseudomonas sp. RS175 0.25 PFR28_01305 Aldose 1-epimerase 0.77 PFR28_04068 hypothetical protein low > 88
Shewanella amazonensis SB2B 0.25 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.85 Sama_1921 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 62
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS32835 aldose 1-epimerase 0.76 BPHYT_RS11190 PrkA family serine protein kinase — —
Shewanella loihica PV-4 0.24 Shew_3272 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.86 Shew_1833 putative serine protein kinase, PrkA (RefSeq) low > 60
Azospirillum sp. SherDot2 0.24 MPMX19_06214 Aldose 1-epimerase 0.70 MPMX19_02157 hypothetical protein low > 112
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS11665 galactose mutarotase 0.76 PFLU_RS27485 PrkA family serine protein kinase low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS11665 galactose mutarotase 0.76 PFLU_RS27485 PrkA family serine protein kinase low > 109
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_01315 aldose epimerase 0.77 AO356_14315 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 104
Pseudomonas simiae WCS417 0.24 PS417_11040 aldose epimerase 0.77 PS417_25830 serine/threonine protein kinase low > 88
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2135 Aldose 1-epimerase (EC 5.1.3.3) 0.77 Pf6N2E2_4801 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Variovorax sp. OAS795 0.23 ABID97_RS06780 aldose epimerase family protein 0.78 ABID97_RS10270 PrkA family serine protein kinase low > 91
Sinorhizobium meliloti 1021 0.23 SMc03798 aldose 1-epimerase 0.67 SMc01267 hypothetical protein low > 103
Alteromonas macleodii MIT1002 0.22 MIT1002_00187 Aldose 1-epimerase precursor 0.84 MIT1002_01233 PrkA family serine protein kinase low > 70
Variovorax sp. SCN45 0.22 GFF5187 Aldose 1-epimerase (EC 5.1.3.3) 0.77 GFF2932 Uncharacterized protein YeaG low > 127
Rhizobium sp. OAE497 0.21 ABIE40_RS18585 aldose epimerase family protein 0.69 ABIE40_RS12550 PrkA family serine protein kinase low > 107
Phaeobacter inhibens DSM 17395 0.18 PGA1_262p00390 aldose 1-epimerase 0.67 PGA1_c02470 putative serine-protein kinase, PrkA type low > 62
Acidovorax sp. GW101-3H11 0.18 Ac3H11_3951 Aldose 1-epimerase (EC 5.1.3.3) 0.76 Ac3H11_1145 Serine protein kinase (prkA protein), P-loop containing low > 79

Not shown: 20 genomes with orthologs for HGI48_RS06620 only; 11 genomes with orthologs for HGI48_RS10255 only