Conservation of cofitness between HER17_RS19160 and HER17_RS21215 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19160 TIGR00645 family protein 1.0 HER17_RS21215 LysE family translocator 0.55 5
Klebsiella michiganensis M5al 0.83 BWI76_RS24270 membrane protein 0.63 BWI76_RS15055 lysine transporter LysE low > 92
Enterobacter sp. TBS_079 0.83 MPMX20_03846 hypothetical protein 0.59 MPMX20_00942 Homoserine/homoserine lactone efflux protein low > 85
Pantoea sp. MT58 0.81 IAI47_01255 TIGR00645 family protein 0.18 IAI47_19320 LysE family translocator low > 76
Dickeya dadantii 3937 0.79 DDA3937_RS04680 TIGR00645 family protein 0.26 DDA3937_RS03260 LysE family translocator low > 74
Pseudomonas sp. S08-1 0.74 OH686_16270 Putative inner membrane protein 0.26 OH686_05525 Threonine efflux protein low > 80
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_14070 hypothetical protein 0.70 AO353_28610 lysine transporter LysE low > 101
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1462 Putative inner membrane protein (Fragment) 0.20 PfGW456L13_387 RhtB family transporter low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_15775 hypothetical protein 0.48 AO356_29475 lysine transporter LysE low > 104
Pseudomonas simiae WCS417 0.70 PS417_24215 hypothetical protein 0.69 PS417_14655 lysine transporter LysE — —
Pseudomonas fluorescens SBW25 0.70 PFLU_RS26135 TIGR00645 family protein 0.18 PFLU_RS25030 LysE family translocator low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS26135 TIGR00645 family protein 0.18 PFLU_RS25030 LysE family translocator low > 109
Shewanella sp. ANA-3 0.69 Shewana3_0644 hypothetical protein (RefSeq) 0.23 Shewana3_0836 lysine exporter protein LysE/YggA (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_01105 hypothetical protein 0.31 CSW01_07120 LysE family translocator low > 62
Azospirillum sp. SherDot2 0.52 MPMX19_01767 hypothetical protein 0.24 MPMX19_00458 Leucine efflux protein low > 112
Azospirillum brasilense Sp245 0.50 AZOBR_RS06580 hypothetical protein 0.26 AZOBR_RS11980 transporter low > 97
Agrobacterium fabrum C58 0.47 Atu2286 hypothetical protein 0.25 Atu2669 RhtB family transporter low > 89
Rhodospirillum rubrum S1H 0.46 Rru_A3669 Uncharacterized protein UPF0114 (NCBI) 0.18 Rru_A3172 Lysine exporter protein (LYSE/YGGA) (NCBI) low > 58
Rhizobium sp. OAE497 0.44 ABIE40_RS13435 TIGR00645 family protein 0.24 ABIE40_RS06290 LysE family translocator low > 107
Caulobacter crescentus NA1000 0.41 CCNA_01088 hypothetical protein 0.54 CCNA_00488 amino acid efflux permease low > 66
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_01088 hypothetical protein 0.54 CCNA_00488 amino acid efflux permease low > 67
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS23775 TIGR00645 family protein 0.26 QEN71_RS00165 LysE family translocator low > 153
Rhodopseudomonas palustris CGA009 0.39 TX73_001195 TIGR00645 family protein 0.25 TX73_004635 LysE family translocator low > 86
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS06990 membrane protein 0.23 BPHYT_RS29790 lysine transporter LysE low > 109
Paraburkholderia graminis OAS925 0.38 ABIE53_001663 uncharacterized protein (TIGR00645 family) 0.26 ABIE53_000390 RhtB (resistance to homoserine/threonine) family protein low > 113
Ralstonia solanacearum GMI1000 0.38 RS_RS09825 membrane protein 0.28 RS_RS00365 LysE family translocator low > 80
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04955 TIGR00645 family protein 0.26 H281DRAFT_02239 resistance to homoserine/threonine (RhtB) family protein — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS02455 membrane protein 0.28 RALBFv3_RS09780 LysE family translocator low > 76
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS14370 TIGR00645 family protein 0.27 ABZR87_RS04960 LysE family translocator low > 80
Ralstonia solanacearum PSI07 0.38 RPSI07_RS14870 membrane protein 0.28 RPSI07_RS23585 LysE family translocator low > 81
Ralstonia solanacearum UW163 0.38 UW163_RS11270 membrane protein 0.28 UW163_RS03800 LysE family translocator — —
Bosea sp. OAE506 0.37 ABIE41_RS03170 TIGR00645 family protein 0.22 ABIE41_RS14940 LysE family translocator low > 77
Variovorax sp. SCN45 0.34 GFF476 InterPro IPR005134 COGs COG2862 0.26 GFF5892 Lysine exporter protein LysE/YggA low > 127
Variovorax sp. OAS795 0.34 ABID97_RS17530 YqhA family protein 0.27 ABID97_RS05270 LysE family translocator low > 91
Acidovorax sp. GW101-3H11 0.33 Ac3H11_950 putative membrane protein 0.25 Ac3H11_770 Lysine exporter protein (LYSE/YGGA) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF4106 putative membrane protein 0.27 GFF3109 Lysine exporter protein (LYSE/YGGA) low > 90
Lysobacter sp. OAE881 0.33 ABIE51_RS01975 TIGR00645 family protein 0.21 ABIE51_RS15690 LysE family translocator low > 62
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS11550 TIGR00645 family protein 0.29 ABZR86_RS13475 LysE family translocator low > 74
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS07765 membrane protein 0.21 HSERO_RS15750 lysine transporter LysE low > 78

Not shown: 29 genomes with orthologs for HER17_RS19160 only; 7 genomes with orthologs for HER17_RS21215 only