Conservation of cofitness between HER17_RS18005 and HER17_RS17765 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT 1.0 HER17_RS17765 allantoinase PuuE 0.58 12
Dickeya dadantii 3937 0.82 DDA3937_RS03245 glycine cleavage system aminomethyltransferase GcvT 0.82 DDA3937_RS16690 allantoinase PuuE low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT 0.82 HGI48_RS16775 allantoinase PuuE low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT 0.82 DZA65_RS17850 allantoinase PuuE low > 75
Serratia liquefaciens MT49 0.81 IAI46_20860 glycine cleavage system aminomethyltransferase GcvT 0.81 IAI46_04175 allantoinase PuuE low > 86
Rahnella sp. WP5 0.81 EX31_RS21510 glycine cleavage system aminomethyltransferase GcvT 0.81 EX31_RS21150 allantoinase PuuE low > 89
Enterobacter sp. TBS_079 0.78 MPMX20_03764 Aminomethyltransferase 0.76 MPMX20_01662 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) 0.76 BWI76_RS10540 allantoinase low > 92
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2957 glycine cleavage system T protein 0.77 EX28DRAFT_1944 putative urate catabolism protein low > 76
Pantoea sp. MT58 0.77 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT 0.79 IAI47_15300 allantoinase PuuE low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_02973 Aminomethyltransferase 0.58 MIT1002_01577 putative urate catabolism protein low > 70
Pseudomonas stutzeri RCH2 0.57 Psest_0181 glycine cleavage system T protein 0.59 Psest_1200 putative urate catabolism protein low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0246 aminomethyltransferase 0.59 Psyr_1809 Polysaccharide deacetylase low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0246 aminomethyltransferase 0.59 Psyr_1809 Polysaccharide deacetylase low > 86
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_902 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.59 PfGW456L13_4180 Uricase (urate oxidase) (EC 1.7.3.3) low > 87
Pseudomonas simiae WCS417 0.53 PS417_27255 glycine cleavage system protein T 0.59 PS417_19415 allantoinase low > 88
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.59 PFLU_RS21385 allantoinase PuuE low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.59 PFLU_RS21385 allantoinase PuuE low > 109
Pseudomonas sp. RS175 0.53 PFR28_04316 Aminomethyltransferase 0.60 PFR28_03143 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08735 glycine cleavage system protein T 0.59 AO353_02320 allantoinase low > 101
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_4485 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.60 Pf6N2E2_5805 Uricase (urate oxidase) (EC 1.7.3.3) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.52 Xcc-8004.362.1 Uricase (urate oxidase) (EC 1.7.3.3) low > 74
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_13035 glycine cleavage system protein T 0.60 AO356_19460 allantoinase (EC 3.5.2.5) (from data) low > 104
Pseudomonas putida KT2440 0.51 PP_5194 aminomethyltransferase 0.60 PP_4286 allantoinase low > 96
Castellaniella sp019104865 MT123 0.49 ABCV34_RS08845 glycine cleavage system aminomethyltransferase GcvT 0.67 ABCV34_RS06095 allantoinase PuuE low > 48
Ralstonia solanacearum GMI1000 0.46 RS_RS16500 aminomethyltransferase 0.70 RS_RS10635 allantoinase PuuE low > 80
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS08650 glycine cleavage system protein T 0.69 RALBFv3_RS03245 allantoinase PuuE low > 76
Ralstonia solanacearum UW163 0.46 UW163_RS04960 glycine cleavage system protein T 0.69 UW163_RS10480 allantoinase PuuE — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS08585 glycine cleavage system protein T 0.69 RPSI07_RS14065 allantoinase PuuE low > 81
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT 0.71 ABZR87_RS15095 allantoinase PuuE 0.54 15
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02411 aminomethyltransferase 0.68 H281DRAFT_05158 putative urate catabolism protein low > 103
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS19320 glycine cleavage system protein T 0.68 BPHYT_RS11555 allantoinase low > 109
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT 0.69 QEN71_RS07020 allantoinase PuuE 0.43 64
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS20060 glycine cleavage system protein T 0.70 RR42_RS05255 allantoinase low > 128
Caulobacter crescentus NA1000 0.24 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.57 CCNA_02688 PuuE-related allantoinase low > 66
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_03465 glycine cleavage system aminomethyltransferase T 0.57 CCNA_02688 PuuE-related allantoinase low > 67
Sinorhizobium meliloti 1021 0.22 SMc02047 glycine cleavage system aminomethyltransferase T 0.55 SM_b20875 hypothetical protein low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF5213 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.58 GFF3309 Uricase (urate oxidase) (EC 1.7.3.3) low > 90
Azospirillum sp. SherDot2 0.22 MPMX19_01029 Aminomethyltransferase 0.63 MPMX19_04444 hypothetical protein low > 112
Rhizobium sp. OAE497 0.22 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT 0.52 ABIE40_RS13840 allantoinase PuuE low > 107
Agrobacterium fabrum C58 0.20 Atu1464 glycine cleavage system T protein, aminomethyltransferase 0.53 Atu2328 hypothetical protein low > 89
Acidovorax sp. GW101-3H11 0.20 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.65 Ac3H11_1095 Uricase (urate oxidase) (EC 1.7.3.3) low > 79
Azospirillum brasilense Sp245 0.20 AZOBR_RS10470 aminomethyltransferase 0.61 AZOBR_RS14190 chitin deacetylase 0.25 50
Variovorax sp. SCN45 0.19 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 0.66 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) low > 127

Not shown: 51 genomes with orthologs for HER17_RS18005 only; 3 genomes with orthologs for HER17_RS17765 only