| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | 1.0 | HER17_RS12860 | | 1-phosphofructokinase | 0.95 | 12 |
| Dickeya dadantii 3937 | 0.91 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.94 | DDA3937_RS09235 | | 1-phosphofructokinase | low | > 74 |
| Rahnella sp. WP5 | 0.88 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.90 | EX31_RS19070 | | 1-phosphofructokinase | low | > 89 |
| Dickeya dianthicola 67-19 | 0.88 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | 0.94 | HGI48_RS09265 | | 1-phosphofructokinase | low | > 71 |
| Dickeya dianthicola ME23 | 0.88 | DZA65_RS21740 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.93 | DZA65_RS09570 | | 1-phosphofructokinase | low | > 75 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.91 | IAI46_17235 | | 1-phosphofructokinase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.82 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.89 | LU632_RS17320 | fruK | 1-phosphofructokinase | low | > 74 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.79 | OHPLBJKB_00245 | | Leucine-specific-binding protein | 0.90 | OHPLBJKB_01542 | | Tagatose-6-phosphate kinase | low | > 73 |
| Escherichia coli ECRC100 | 0.79 | OKFHMN_16740 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | OKFHMN_23440 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | low | > 80 |
| Escherichia coli ECOR27 | 0.79 | NOLOHH_08535 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | NOLOHH_15015 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | low | > 75 |
| Escherichia coli ECRC102 | 0.79 | NIAGMN_14510 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | NIAGMN_21205 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | — | — |
| Escherichia coli ECRC99 | 0.79 | KEDOAH_11400 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | KEDOAH_04745 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | — | — |
| Escherichia coli ECRC98 | 0.79 | JDDGAC_20370 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | JDDGAC_27400 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | low | > 86 |
| Escherichia coli ECRC62 | 0.79 | BNILDI_02970 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | BNILDI_13935 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | low | > 75 |
| Escherichia coli ECRC101 | 0.79 | MCAODC_07270 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | MCAODC_14490 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | 0.51 | 81 |
| Escherichia coli BW25113 | 0.79 | b3458 | livK | leucine transporter subunit (NCBI) | 0.90 | b2168 | fruK | 1-phosphofructokinase (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.79 | EFB2_00364 | | Leucine-specific-binding protein | 0.90 | EFB2_01689 | | Tagatose-6-phosphate kinase | low | > 86 |
| Escherichia coli ECOR38 | 0.79 | HEPCGN_15560 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | HEPCGN_22705 | fruB | fused PTS fructose transporter subunit IIA/HPr protein | low | > 87 |
| Enterobacter asburiae PDN3 | 0.79 | EX28DRAFT_4290 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.89 | EX28DRAFT_0395 | | 1-phosphofructokinase | 0.56 | 38 |
| Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS19775 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | 0.90 | ECOLIN_RS12680 | | 1-phosphofructokinase | low | > 55 |
| Escherichia coli BL21 | 0.78 | ECD_03307 | | leucine transporter subunit | 0.90 | ECD_02097 | | fructose-1-phosphate kinase | low | > 61 |
| Enterobacter sp. TBS_079 | 0.78 | MPMX20_04334 | | Leucine-specific-binding protein | 0.90 | MPMX20_03132 | | Tagatose-6-phosphate kinase | low | > 85 |
| Pantoea sp. MT58 | 0.78 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.89 | IAI47_06655 | | 1-phosphofructokinase | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF545 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.90 | GFF3772 | | 1-phosphofructokinase (EC 2.7.1.56) | low | > 78 |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS26350 | | branched chain amino acid ABC transporter substrate-binding protein | 0.89 | BWI76_RS19730 | | 1-phosphofructokinase | low | > 92 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | 0.35 | Psyr_0822 | | 1-phosphofructokinase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | 0.35 | Psyr_0822 | | 1-phosphofructokinase | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.38 | Psest_3354 | | 1-phosphofructokinase (EC 2.7.1.56) (from data) | low | > 67 |
| Pseudomonas fluorescens FW300-N2C3 | 0.61 | AO356_05320 | | leucine ABC transporter substrate-binding protein | 0.37 | AO356_07330 | | 1-phosphofructokinase (EC 2.7.1.56) (from data) | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.61 | AO353_17125 | | leucine ABC transporter substrate-binding protein | 0.38 | AO353_05480 | | 1-phosphofructokinase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | 0.36 | Pf6N2E2_3338 | | 1-phosphofructokinase (EC 2.7.1.56) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.39 | Pf1N1B4_1145 | | 1-phosphofructokinase (EC 2.7.1.56) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.38 | PfGW456L13_5074 | | 1-phosphofructokinase (EC 2.7.1.56) | low | > 87 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | 0.38 | PFR28_00106 | | Tagatose-6-phosphate kinase | low | > 88 |
| Pseudomonas putida KT2440 | 0.59 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | 0.37 | PP_0794 | | 1-phosphofructokinase monomer | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.38 | PFLU_RS04015 | | 1-phosphofructokinase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.38 | PFLU_RS04015 | | 1-phosphofructokinase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | 0.39 | PS417_03970 | | 1-phosphofructokinase | low | > 88 |
| Marinobacter adhaerens HP15 | 0.58 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | 0.32 | HP15_3724 | | 1-phosphofructokinase | low | > 73 |
| Azospirillum sp. SherDot2 | 0.38 | MPMX19_04840 | | Leu/Ile/Val-binding protein | 0.29 | MPMX19_05330 | | Tagatose-6-phosphate kinase | — | — |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A1746 | | Extracellular ligand-binding receptor (NCBI) | 0.31 | Rru_A1971 | | PfkB (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.37 | TX73_019730 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.14 | TX73_001970 | | 1-phosphofructokinase family hexose kinase | low | > 86 |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS08260 | | L-proline and D-alanine ABC transporter, substrate-binding component (from data) | 0.28 | AZOBR_RS30840 | | hypothetical protein | low | > 97 |
| Paraburkholderia graminis OAS925 | 0.25 | ABIE53_000461 | | branched-chain amino acid transport system substrate-binding protein | 0.24 | ABIE53_004212 | | 1-phosphofructokinase | low | > 113 |
| Ralstonia solanacearum UW163 | 0.24 | UW163_RS08975 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.33 | UW163_RS07260 | | 1-phosphofructokinase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS04695 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.33 | RALBFv3_RS06365 | | 1-phosphofructokinase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.24 | RPSI07_RS12690 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.33 | RPSI07_RS10875 | | 1-phosphofructokinase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.24 | RS_RS12255 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.32 | RS_RS14315 | | 1-phosphofructokinase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS00315 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.32 | ABZR87_RS02045 | | 1-phosphofructokinase | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_4169 | | Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) | 0.16 | Ac3H11_779 | | Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56) | low | > 79 |
| Fusobacterium nucleatum SB010 | 0.17 | HUW76_08115 | | ABC transporter substrate-binding protein | 0.23 | HUW76_08140 | | 1-phosphofructokinase | low | > 35 |
| Dinoroseobacter shibae DFL-12 | 0.12 | Dshi_1522 | | Extracellular ligand-binding receptor (RefSeq) | 0.15 | Dshi_1621 | | PfkB domain protein (RefSeq) | low | > 64 |
Not shown: 18 genomes with orthologs for HER17_RS00495 only; 6 genomes with orthologs for HER17_RS12860 only