| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS19675 | | TRAP transporter substrate-binding protein | 1.0 | HER17_RS09660 | | ATP-dependent RNA helicase HrpA | 0.57 | 8 |
| Rahnella sp. WP5 | 0.80 | EX31_RS08010 | | TRAP transporter substrate-binding protein | 0.82 | EX31_RS06495 | | ATP-dependent RNA helicase HrpA | low | > 89 |
| Enterobacter sp. TBS_079 | 0.75 | MPMX20_04349 | | Solute-binding protein | 0.82 | MPMX20_02189 | | hypothetical protein | low | > 85 |
| Pantoea sp. MT58 | 0.66 | IAI47_03230 | | TRAP transporter substrate-binding protein | 0.82 | IAI47_09520 | | ATP-dependent RNA helicase HrpA | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_3957 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.40 | Ac3H11_896 | | macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. | low | > 79 |
| Pseudomonas putida KT2440 | 0.50 | PP_1169 | | D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) | 0.46 | PP_4546 | | ATP-dependent helicase HrpA | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_0363 | | tripartite ATP-independent periplasmic transporter solute receptor, DctP family | 0.44 | Psest_1339 | | ATP-dependent helicase HrpA | low | > 67 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_17370 | | C4-dicarboxylate ABC transporter | 0.46 | PS417_20575 | | ATP-dependent helicase HrpA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_487 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.47 | Pf6N2E2_2694 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.46 | PFLU_RS22265 | | ATP-dependent RNA helicase HrpA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS19295 | | TRAP transporter substrate-binding protein | 0.46 | PFLU_RS22265 | | ATP-dependent RNA helicase HrpA | low | > 109 |
| Pseudomonas sp. RS175 | 0.48 | PFR28_02438 | | Solute-binding protein | 0.47 | PFR28_00739 | | hypothetical protein | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.47 | Psyr_3831 | | ATP-dependent helicase HrpA | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_0900 | | TRAP dicarboxylate transporter- DctP subunit | 0.47 | Psyr_3831 | | ATP-dependent helicase HrpA | 0.27 | 49 |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_23055 | | C4-dicarboxylate ABC transporter | 0.46 | AO356_04280 | | ATP-dependent RNA helicase HrpA | low | > 104 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF797 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.38 | GFF4301 | | macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. | low | > 90 |
| Variovorax sp. OAS795 | 0.33 | ABID97_RS10340 | | TRAP transporter substrate-binding protein | 0.42 | ABID97_RS16615 | | ATP-dependent RNA helicase HrpA | low | > 91 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_05324 | | tripartite ATP-independent transporter solute receptor, DctP family | 0.37 | H281DRAFT_00445 | | ATP-dependent helicase HrpA | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.30 | ABIE53_006502 | | tripartite ATP-independent transporter DctP family solute receptor | 0.41 | ABIE53_002813 | | ATP-dependent helicase HrpA | low | > 113 |
| Alteromonas macleodii MIT1002 | 0.30 | MIT1002_02426 | | Extracytoplasmic solute receptor protein YiaO | 0.54 | MIT1002_01685 | | ATP-dependent RNA helicase HrpB | low | > 70 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_03838 | | Solute-binding protein | 0.83 | OHPLBJKB_02301 | | hypothetical protein | low | > 73 |
| Escherichia coli ECRC62 | 0.29 | BNILDI_07130 | | Bacterial extracellular solute-binding protein, family 7 | 0.83 | BNILDI_17845 | hrpA | ATP-dependent RNA helicase HrpA | low | > 75 |
| Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS24175 | | C4-dicarboxylate ABC transporter | 0.37 | BPHYT_RS12980 | | ATP-dependent helicase | low | > 109 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF3130 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.83 | GFF2632 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | low | > 78 |
| Klebsiella michiganensis M5al | 0.29 | BWI76_RS24125 | | hypothetical protein | 0.83 | BWI76_RS13165 | | ATP-dependent RNA helicase HrpA | low | > 92 |
| Variovorax sp. SCN45 | 0.28 | GFF2918 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | 0.41 | GFF247 | | ATP-dependent helicase HrpA | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS21090 | | TRAP transporter substrate-binding protein | 0.42 | ABZR87_RS11020 | | ATP-dependent RNA helicase HrpA | low | > 80 |
| Escherichia coli Nissle 1917 | 0.28 | ECOLIN_RS17380 | | TRAP transporter substrate-binding protein | 0.83 | ECOLIN_RS08180 | | ATP-dependent RNA helicase HrpA | — | — |
| Lysobacter sp. OAE881 | 0.28 | ABIE51_RS02850 | | TRAP transporter substrate-binding protein | 0.36 | ABIE51_RS05155 | | ATP-dependent RNA helicase HrpA | low | > 62 |
| Serratia liquefaciens MT49 | 0.27 | IAI46_00375 | | TRAP transporter substrate-binding protein | 0.85 | IAI46_13330 | | ATP-dependent RNA helicase HrpA | low | > 86 |
| Escherichia coli ECOR38 | 0.26 | HEPCGN_18535 | | Bacterial extracellular solute-binding protein, family 7 | 0.83 | HEPCGN_26110 | hrpA | ATP-dependent RNA helicase HrpA | low | > 87 |
| Escherichia coli ECOR27 | 0.26 | NOLOHH_11100 | | Bacterial extracellular solute-binding protein, family 7 | 0.83 | NOLOHH_19390 | hrpA | ATP-dependent RNA helicase HrpA | low | > 75 |
| Escherichia fergusonii Becca | 0.24 | EFB2_00227 | | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO | 0.83 | EFB2_02565 | | hypothetical protein | low | > 86 |
| Escherichia coli BW25113 | 0.24 | b3579 | yiaO | predicted transporter (NCBI) | 0.83 | b1413 | hrpA | ATP-dependent helicase (RefSeq) | low | > 76 |
| Escherichia coli BL21 | 0.24 | ECD_03431 | | 2,3-diketo-L-gulonate-binding periplasmic protein | 0.83 | ECD_01368 | | putative ATP-dependent helicase | low | > 61 |
| Castellaniella sp019104865 MT123 | 0.23 | ABCV34_RS11540 | | TRAP transporter substrate-binding protein | 0.40 | ABCV34_RS02420 | | ATP-dependent RNA helicase HrpA | low | > 48 |
| Herbaspirillum seropedicae SmR1 | 0.21 | HSERO_RS04240 | | C4-dicarboxylate ABC transporter | 0.42 | HSERO_RS17315 | | ATP-dependent helicase | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.20 | CSW01_08925 | | sialic acid-binding protein | 0.72 | CSW01_06950 | | ATP-dependent RNA helicase HrpA | low | > 62 |
| Cupriavidus basilensis FW507-4G11 | 0.18 | RR42_RS10600 | | C4-dicarboxylate ABC transporter substrate-binding protein | 0.43 | RR42_RS13030 | | ATP-dependent helicase | low | > 128 |
| Dechlorosoma suillum PS | 0.18 | Dsui_3155 | | tripartite ATP-independent periplasmic transporter solute receptor, DctP family | 0.41 | Dsui_1373 | | ATP-dependent helicase HrpA | low | > 51 |
| Shewanella amazonensis SB2B | 0.15 | Sama_2209 | | alpha-ketoglutarate TRAP transporter, solute receptor component (from data) | 0.58 | Sama_1619 | | ATP-dependent helicase HrpA (RefSeq) | low | > 62 |
| Pseudomonas sp. S08-1 | 0.11 | OH686_16140 | | TRAP-type transporter, substrate-binding protein | 0.45 | OH686_05730 | | RNA helicase HrpA | low | > 80 |
Not shown: 18 genomes with orthologs for HER17_RS19675 only; 26 genomes with orthologs for HER17_RS09660 only