Conservation of cofitness between HER17_RS05585 and HER17_RS09030 in Pectobacterium carotovorum WPP14

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05585 DNA/RNA nuclease SfsA 1.0 HER17_RS09030 cytochrome c biogenesis heme-transporting ATPase CcmA 0.62 11
Serratia liquefaciens MT49 0.75 IAI46_21205 DNA/RNA nuclease SfsA 0.58 IAI46_18110 cytochrome c biogenesis heme-transporting ATPase CcmA low > 86
Rahnella sp. WP5 0.71 EX31_RS03245 DNA/RNA nuclease SfsA 0.58 EX31_RS19770 cytochrome c biogenesis heme-transporting ATPase CcmA low > 89
Pantoea sp. MT58 0.67 IAI47_15630 DNA/RNA nuclease SfsA 0.52 IAI47_06065 cytochrome c biogenesis heme-transporting ATPase CcmA low > 76
Escherichia coli ECRC102 0.66 NIAGMN_08190 sfsA DNA/RNA nuclease SfsA 0.55 NIAGMN_21045 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA — —
Escherichia coli ECRC62 0.66 BNILDI_08985 sfsA DNA/RNA nuclease SfsA 0.55 BNILDI_13775 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA low > 75
Escherichia coli ECRC99 0.66 KEDOAH_17815 sfsA DNA/RNA nuclease SfsA 0.55 KEDOAH_04905 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA — —
Escherichia coli ECOR27 0.66 NOLOHH_02685 sfsA DNA/RNA nuclease SfsA 0.55 NOLOHH_14855 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA low > 75
Escherichia coli ECRC98 0.66 JDDGAC_13935 sfsA DNA/RNA nuclease SfsA 0.55 JDDGAC_27240 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA low > 86
Escherichia coli ECRC101 0.66 MCAODC_00855 sfsA DNA/RNA nuclease SfsA 0.55 MCAODC_14330 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA low > 87
Escherichia coli BL21 0.66 ECD_00145 sugar fermentation stimulation protein A 0.55 ECD_02128 heme export ABC transporter ATPase low > 61
Escherichia coli Nissle 1917 0.66 ECOLIN_RS00820 DNA/RNA nuclease SfsA 0.55 ECOLIN_RS12860 cytochrome c biogenesis heme-transporting ATPase CcmA — —
Escherichia coli ECRC100 0.66 OKFHMN_10340 sfsA DNA/RNA nuclease SfsA 0.55 OKFHMN_23280 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA low > 80
Escherichia coli BW25113 0.66 b0146 sfsA sugar fermentation stimulation protein A (NCBI) 0.55 b2201 ccmA ATP binding protein of heme exporter A (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03516 Sugar fermentation stimulation protein A 0.55 OHPLBJKB_01510 Cytochrome c biogenesis ATP-binding export protein CcmA low > 73
Escherichia coli ECOR38 0.66 HEPCGN_08290 sfsA DNA/RNA nuclease SfsA 0.55 HEPCGN_22545 ccmA cytochrome c biogenesis heme-transporting ATPase CcmA low > 87
Escherichia fergusonii Becca 0.65 EFB2_03898 Sugar fermentation stimulation protein A 0.55 EFB2_01655 Cytochrome c biogenesis ATP-binding export protein CcmA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF86 Sugar/maltose fermentation stimulation protein homolog 0.47 GFF4882 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA — —
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_03160 DNA/RNA nuclease SfsA 0.52 CSW01_10290 cytochrome c biogenesis ATP-binding export protein CcmA low > 62
Shewanella loihica PV-4 0.56 Shew_3128 sugar fermentation stimulation protein (RefSeq) 0.45 Shew_0190 cytochrome c biogenesis protein CcmA (RefSeq) — —
Shewanella amazonensis SB2B 0.53 Sama_0781 sugar fermentation stimulation protein A (RefSeq) 0.43 Sama_0245 cytochrome c biogenesis protein CcmA (RefSeq) low > 62
Shewanella sp. ANA-3 0.52 Shewana3_3403 sugar fermentation stimulation protein A (RefSeq) 0.45 Shewana3_0231 cytochrome c biogenesis protein CcmA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.51 SO0875 sfsA sugar fermentation stimulation protein (NCBI ptt file) 0.45 SO0263 ccmA heme exporter protein CcmA (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0055 sugar fermentation stimulation protein 0.28 B158DRAFT_1323 heme ABC exporter, ATP-binding protein CcmA low > 40
Marinobacter adhaerens HP15 0.48 HP15_333 sugar fermentation stimulation protein-like protein 0.39 HP15_2286 heme exporter protein CcmA — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.41 Psyr_3393 Heme exporter protein CcmA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.41 Psyr_3393 Heme exporter protein CcmA — —
Pseudomonas stutzeri RCH2 0.45 Psest_1005 sugar fermentation stimulation protein 0.45 Psest_1754 heme ABC exporter, ATP-binding protein CcmA — —
Pseudomonas putida KT2440 0.44 PP_4691 sugar fermentation stimulation protein A 0.42 PP_4327 Cytochrome c biogenesis ATP-binding export protein CcmA — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5162 Sugar/maltose fermentation stimulation protein homolog 0.41 Pf6N2E2_2560 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA — —
Pseudomonas sp. RS175 0.44 PFR28_03712 Sugar fermentation stimulation protein A 0.42 PFR28_00865 Cytochrome c biogenesis ATP-binding export protein CcmA — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_16105 XRE family transcriptional regulator 0.45 AO356_03660 cytochrome C biogenesis protein CcmA — —
Pseudomonas fluorescens SBW25 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.45 PFLU_RS08645 cytochrome c biogenesis heme-transporting ATPase CcmA — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.45 PFLU_RS08645 cytochrome c biogenesis heme-transporting ATPase CcmA — —
Pseudomonas sp. S08-1 0.43 OH686_17290 sugar fermentation stimulation protein 0.42 OH686_02660 heme ABC exporter, ATP-binding protein CcmA — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2864 Sugar/maltose fermentation stimulation protein homolog 0.45 Pf1N1B4_3639 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA — —
Dechlorosoma suillum PS 0.43 Dsui_0297 sugar fermentation stimulation protein 0.39 Dsui_1167 heme ABC exporter, ATP-binding protein CcmA — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1530 Sugar/maltose fermentation stimulation protein homolog 0.45 PfGW456L13_4316 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_14430 XRE family transcriptional regulator 0.44 AO353_18850 cytochrome C biogenesis protein CcmA — —
Pseudomonas simiae WCS417 0.41 PS417_23865 XRE family transcriptional regulator 0.45 PS417_08690 cytochrome C biogenesis protein CcmA — —
Magnetospirillum magneticum AMB-1 0.41 AMB_RS08095 DNA/RNA nuclease SfsA 0.35 AMB_RS21155 cytochrome c biogenesis ATP-binding export protein CcmA — —
Alteromonas macleodii MIT1002 0.40 MIT1002_03689 Sugar fermentation stimulation protein A 0.45 MIT1002_00960 Cytochrome c biogenesis ATP-binding export protein CcmA — —
Dinoroseobacter shibae DFL-12 0.37 Dshi_0118 sugar fermentation stimulation protein (RefSeq) 0.26 Dshi_1855 heme exporter protein CcmA (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.35 PGA1_c29210 sugar fermentation stimulation protein A 0.24 PGA1_c18890 cytochrome c biogenesis ATP-binding export protein CcmA — —
Agrobacterium fabrum C58 0.34 Atu1605 sugar fermentation stimulation protein 0.32 Atu2686 ABC transporter, nucleotide binding/ATPase protein (heme) — —
Rhodospirillum rubrum S1H 0.34 Rru_A0735 Sugar fermentation stimulation protein (NCBI) 0.26 Rru_A0040 Heme exporter protein CcmA (NCBI) — —
Azospirillum sp. SherDot2 0.33 MPMX19_00188 Sugar fermentation stimulation protein A 0.27 MPMX19_02464 Cytochrome c biogenesis ATP-binding export protein CcmA — —
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_02757 sugar fermentation stimulation protein A 0.24 CCNA_03782 cytochrome c biogenesis ATP-binding export protein CcmA low > 67
Caulobacter crescentus NA1000 0.31 CCNA_02757 sugar fermentation stimulation protein A 0.24 CCNA_03782 cytochrome c biogenesis ATP-binding export protein CcmA low > 66
Sinorhizobium meliloti 1021 0.29 SMc00297 sugar fermentation stimulation protein A 0.29 SMc03847 cytochrome c biogenesis protein CcmA — —

Not shown: 10 genomes with orthologs for HER17_RS05585 only; 11 genomes with orthologs for HER17_RS09030 only