Conservation of cofitness between HER17_RS12030 and HER17_RS05555 in Pectobacterium carotovorum WPP14

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS05555 pantoate--beta-alanine ligase 0.91 6
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.82 IAI46_21245 pantoate--beta-alanine ligase low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.73 BNILDI_08920 panC pantoate--beta-alanine ligase low > 75
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.73 b0133 panC pantoate--beta-alanine ligase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.73 OHPLBJKB_03528 Pantothenate synthetase low > 73
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.73 HEPCGN_08380 panC pantoate--beta-alanine ligase low > 87
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.73 ECD_00132 pantothenate synthetase — —
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.73 NOLOHH_02750 panC pantoate--beta-alanine ligase low > 75
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.76 EX31_RS03285 pantoate--beta-alanine ligase low > 89
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.73 EFB2_03911 Pantothenate synthetase low > 86
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.73 KEDOAH_17750 panC pantoate--beta-alanine ligase — —
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.73 NIAGMN_08255 panC pantoate--beta-alanine ligase — —
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.73 MCAODC_00920 panC pantoate--beta-alanine ligase low > 87
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.73 OKFHMN_10405 panC pantoate--beta-alanine ligase low > 80
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.73 JDDGAC_14000 panC pantoate--beta-alanine ligase low > 86
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.72 BWI76_RS04990 pantoate--beta-alanine ligase low > 92
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.78 HGI48_RS16075 pantoate--beta-alanine ligase 0.81 12
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.71 MPMX20_00826 Pantothenate synthetase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.72 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.80 DDA3937_RS15960 pantoate--beta-alanine ligase 0.74 28
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.71 EX28DRAFT_3729 pantoate--beta-alanine ligase low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.82 DZA65_RS17160 pantoate--beta-alanine ligase 0.83 5
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.77 IAI47_15660 pantoate--beta-alanine ligase low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.75 LU632_RS20105 panC pantoate--beta-alanine ligase 0.78 30
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.49 Shew_3134 pantoate--beta-alanine ligase (RefSeq) — —
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.51 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) — —
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.51 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) — —
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.51 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.61 CSW01_03130 pantoate--beta-alanine ligase — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05115 amino acid aminotransferase 0.33 ABCV34_RS14585 pantoate--beta-alanine ligase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.130.1 hypothetical protein 0.41 Xcc-8004.3051.1 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13195 Aminotransferase 0.44 OKGIIK_03890 panC pantoate--beta-alanine ligase low > 52
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.52 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.52 AO356_16055 pantoate--beta-alanine ligase — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.44 LRK54_RS15120 pantoate--beta-alanine ligase — —
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.49 PS417_23915 pantoate--beta-alanine ligase low > 88
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.52 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 87
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.48 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.48 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.52 PFR28_03722 Pantothenate synthetase — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS10325 amino acid aminotransferase 0.44 LRK55_RS14835 pantoate--beta-alanine ligase low > 63
Marinobacter adhaerens HP15 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) 0.51 HP15_323 pantothenate synthetase — —
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.48 MIT1002_03695 Pantothenate synthetase — —
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.56 OH686_17240 pantoate--beta-alanine ligase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.53 Psyr_0827 pantothenate synthetase 0.46 43
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.53 Psyr_0827 pantothenate synthetase 0.31 71
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1688 Aspartate/tyrosine/aromatic aminotransferase 0.41 Ga0059261_2453 pantoate--beta-alanine ligase — —
Sinorhizobium meliloti 1021 0.40 SMc00387 aromatic amino acid aminotransferase 0.38 SMc01880 pantoate--beta-alanine ligase low > 103
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29420 aromatic-amino-acid transaminase [EC:2.6.1.57] (from data) 0.41 PGA1_c32040 pantothenate synthetase PanC — —
Azospirillum sp. SherDot2 0.39 MPMX19_05266 Aspartate aminotransferase 0.39 MPMX19_04465 Pantothenate synthetase low > 112
Dinoroseobacter shibae DFL-12 0.35 Dshi_0145 Aspartate transaminase (RefSeq) 0.41 Dshi_2952 pantoate--beta-alanine ligase (RefSeq) — —

Not shown: 1 genomes with orthologs for HER17_RS12030 only; 47 genomes with orthologs for HER17_RS05555 only