Conservation of cofitness between HER17_RS10870 and HER17_RS05385 in Pectobacterium carotovorum WPP14

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.95 5
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.88 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase low > 74
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.88 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase low > 75
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.88 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase low > 71
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.85 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase — —
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.80 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase 0.96 15
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.73 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.76 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.77 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.78 48
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.78 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.77 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase 0.42 50
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.77 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.77 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) — —
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.77 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.77 OHPLBJKB_01109 P-protein low > 73
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.77 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.77 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.77 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.77 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.77 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.74 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.77 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.78 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) — —
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.77 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.75 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase 0.68 38
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.56 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase — —
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.54 MIT1002_01316 P-protein — —
Pseudomonas putida KT2440 0.68 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.20 PP_1769 chorismate mutase/Prephenate dehydratase — —
Marinobacter adhaerens HP15 0.68 HP15_1854 transcriptional regulator, LysR family 0.20 HP15_1362 chorismate mutase / prephenate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.20 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.80 42
Pseudomonas simiae WCS417 0.68 PS417_08460 CysB family transcriptional regulator 0.21 PS417_08125 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.20 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas sp. S08-1 0.67 OH686_01730 Cys regulon transcriptional activator CysB 0.20 OH686_20870 Chorismate mutase I / Prephenate dehydratase low > 80
Pseudomonas fluorescens SBW25 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_19060 CysB family transcriptional regulator 0.20 AO353_02070 prephenate dehydratase 0.71 3
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.21 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_03180 CysB family transcriptional regulator 0.21 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.21 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas sp. RS175 0.67 PFR28_00966 HTH-type transcriptional regulator CysB 0.21 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.20 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.20 Psyr_3645 prephenate dehydratase — —
Pseudomonas stutzeri RCH2 0.66 Psest_2329 Transcriptional regulator 0.20 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.18 Dsui_1940 chorismate mutase, clade 2 — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.18 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 90
Variovorax sp. SCN45 0.43 GFF244 Cys regulon transcriptional activator CysB 0.18 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.72 20
Variovorax sp. OAS795 0.43 ABID97_RS16600 CysB family HTH-type transcriptional regulator 0.18 ABID97_RS09515 prephenate dehydratase — —
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2455 Transcriptional regulator 0.33 B158DRAFT_1385 Prephenate dehydratase low > 40
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.19 ABCV34_RS07110 prephenate dehydratase low > 48
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.19 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.69 18
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.19 OKGIIK_06915 pheA prephenate dehydratase low > 52
Rhodanobacter denitrificans MT42 0.36 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.20 LRK55_RS00135 prephenate dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.20 LRK54_RS00395 prephenate dehydratase low > 59
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.19 ABZR86_RS02225 prephenate dehydratase 0.97 9
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.20 ABIE51_RS12145 prephenate dehydratase 0.97 18
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.18 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.55 67

Not shown: 5 genomes with orthologs for HER17_RS10870 only; 14 genomes with orthologs for HER17_RS05385 only