Conservation of cofitness between Psest_2104 and Psest_0959 in Pseudomonas stutzeri RCH2

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2104 IscR-regulated protein YhgI 1.0 Psest_0959 Uncharacterized protein conserved in bacteria 0.35 19
Pseudomonas sp. S08-1 0.86 OH686_03315 [4Fe-4S] cluster carrier protein NfuA 0.64 OH686_17035 UPF0125 protein RatB — —
Pseudomonas sp. RS175 0.83 PFR28_01371 Fe/S biogenesis protein NfuA 0.45 PFR28_00068 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_2066 NfuA Fe-S protein maturation 0.41 Pf6N2E2_3374 UPF0125 protein yfjF — —
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_00535 Fe/S biogenesis protein NfuA 0.44 AO356_07525 protein RnfH — —
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_2849 NfuA Fe-S protein maturation 0.50 PfGW456L13_5109 UPF0125 protein yfjF — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_21625 Fe/S biogenesis protein NfuA 0.50 AO353_05675 protein RnfH 0.31 70
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_5659 NfuA Fe-S protein maturation 0.58 Pf1N1B4_1181 UPF0125 protein yfjF low > 87
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal 0.46 Psyr_4200 Protein of unknown function UPF0125 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal 0.46 Psyr_4200 Protein of unknown function UPF0125 — —
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS13010 Fe-S biogenesis protein NfuA 0.48 PFLU_RS25925 RnfH family protein low > 109
Pseudomonas fluorescens SBW25 0.82 PFLU_RS13010 Fe-S biogenesis protein NfuA 0.48 PFLU_RS25925 RnfH family protein low > 109
Pseudomonas simiae WCS417 0.82 PS417_12320 amino acid ABC transporter substrate-binding protein 0.51 PS417_24085 protein RnfH — —
Marinobacter adhaerens HP15 0.65 HP15_1791 yhgI protein 0.40 HP15_3087 protein belonging to uncharacterized protein family UPF0125 — —
Dickeya dianthicola ME23 0.56 DZA65_RS20875 Fe-S biogenesis protein NfuA 0.42 DZA65_RS04225 RnfH family protein low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS19785 Fe-S biogenesis protein NfuA 0.42 HGI48_RS04310 RnfH family protein — —
Enterobacter asburiae PDN3 0.56 EX28DRAFT_4128 IscR-regulated protein YhgI 0.40 EX28DRAFT_2721 Uncharacterized protein conserved in bacteria — —
Erwinia tracheiphila SCR3 0.56 LU632_RS22985 nfuA Fe-S biogenesis protein NfuA 0.41 LU632_RS17015 RnfH family protein — —
Rahnella sp. WP5 0.56 EX31_RS04925 Fe-S biogenesis protein NfuA 0.34 EX31_RS21750 RnfH family protein low > 89
Klebsiella michiganensis M5al 0.56 BWI76_RS26620 Fe-S biogenesis protein NfuA 0.38 BWI76_RS21570 RnfH family protein low > 92
Dickeya dadantii 3937 0.56 DDA3937_RS19655 Fe-S biogenesis protein NfuA 0.42 DDA3937_RS04315 RnfH family protein — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS01545 Fe-S biogenesis protein NfuA 0.36 HER17_RS17430 RnfH family protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF603 NfuA Fe-S protein maturation 0.36 GFF4160 UPF0125 protein yfjF low > 78
Enterobacter sp. TBS_079 0.55 MPMX20_04301 Fe/S biogenesis protein NfuA 0.38 MPMX20_03488 Persistence and stress-resistance antitoxin PasI low > 85
Serratia liquefaciens MT49 0.55 IAI46_23835 Fe-S biogenesis protein NfuA 0.38 IAI46_19645 RnfH family protein low > 86
Escherichia fergusonii Becca 0.55 EFB2_00414 Fe/S biogenesis protein NfuA 0.38 EFB2_01275 Persistence and stress-resistance antitoxin PasI low > 86
Escherichia coli ECRC62 0.55 BNILDI_02740 NfuA family Fe-S biogenesis protein 0.38 BNILDI_11610 rnfH RnfH family protein — —
Pantoea sp. MT58 0.55 IAI47_01780 Fe-S biogenesis protein NfuA 0.44 IAI47_04800 RnfH family protein low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00289 Fe/S biogenesis protein NfuA 0.38 OHPLBJKB_01089 hypothetical protein low > 73
Escherichia coli BL21 0.55 ECD_03266 Fe/S biogenesis protein, putative scaffold/chaperone protein 0.38 ECD_02506 UPF0125 family protein low > 60
Escherichia coli ECRC99 0.55 KEDOAH_11150 NfuA family Fe-S biogenesis protein 0.37 KEDOAH_07085 rnfH RnfH family protein — —
Escherichia coli ECRC102 0.55 NIAGMN_14760 NfuA family Fe-S biogenesis protein 0.37 NIAGMN_18905 rnfH RnfH family protein — —
Escherichia coli ECRC101 0.55 MCAODC_07520 NfuA family Fe-S biogenesis protein 0.37 MCAODC_11660 rnfH RnfH family protein — —
Escherichia coli ECRC101 0.55 OKFHMN_16990 NfuA family Fe-S biogenesis protein 0.37 OKFHMN_21135 rnfH RnfH family protein — —
Escherichia coli ECOR38 0.55 HEPCGN_15800 NfuA family Fe-S biogenesis protein 0.38 HEPCGN_20255 rnfH RnfH family protein low > 85
Escherichia coli BW25113 0.55 b3414 gntY predicted gluconate transport associated protein (NCBI) 0.38 b2618 b2618 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC98 0.55 JDDGAC_20620 NfuA family Fe-S biogenesis protein 0.37 JDDGAC_24800 rnfH RnfH family protein — —
Escherichia coli Nissle 1917 0.55 ECOLIN_RS19500 Fe-S biogenesis protein NfuA 0.38 ECOLIN_RS14785 RnfH family protein low > 52
Escherichia coli ECOR27 0.55 NOLOHH_08775 NfuA family Fe-S biogenesis protein 0.38 NOLOHH_12805 rnfH RnfH family protein — —
Shewanella oneidensis MR-1 0.53 SO4619 yhgI yhgI protein (NCBI ptt file) 0.38 SO1475 conserved hypothetical protein (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.53 MIT1002_04019 Fe/S biogenesis protein NfuA 0.38 MIT1002_01808 hypothetical protein — —
Shewanella loihica PV-4 0.53 Shew_0106 putative DNA uptake protein (RefSeq) 0.46 Shew_1270 hypothetical protein (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_13725 Fe-S biogenesis protein NfuA 0.39 CSW01_04385 RnfH family protein — —
Shewanella sp. ANA-3 0.52 Shewana3_4003 putative DNA uptake protein (RefSeq) 0.39 Shewana3_2950 hypothetical protein (RefSeq) — —
Shewanella amazonensis SB2B 0.50 Sama_3502 putative DNA uptake protein (RefSeq) 0.42 Sama_2386 hypothetical protein (RefSeq) — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0853 IscR-regulated protein YhgI 0.40 B158DRAFT_0971 Uncharacterized protein conserved in bacteria — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS02740 NfuA family Fe-S biogenesis protein 0.38 ABZR86_RS05690 RnfH family protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS17905 NfuA family Fe-S biogenesis protein 0.33 LRK54_RS17935 RnfH family protein low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS17760 NfuA family Fe-S biogenesis protein 0.33 LRK55_RS17790 RnfH family protein low > 63
Lysobacter sp. OAE881 0.44 ABIE51_RS11785 NfuA family Fe-S biogenesis protein 0.24 ABIE51_RS11670 RnfH family protein — —
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_07395 NfuA family Fe-S biogenesis protein 0.33 OKGIIK_07365 RnfH family protein — —

Not shown: 3 genomes with orthologs for Psest_2104 only; 9 genomes with orthologs for Psest_0959 only